The Pangenome Structure of Escherichia coli: Comparative Genomic Analysis of E. coli Commensal and Pathogenic Isolates DA Rasko, MJ Rosovitz, GSA Myers, EF Mongodin, WF Fricke, P Gajer, ... Journal of bacteriology 190 (20), 6881-6893, 2008 | 1068 | 2008 |
Genome sequence of the bioplastic-producing “Knallgas” bacterium Ralstonia eutropha H16 A Pohlmann, WF Fricke, F Reinecke, B Kusian, H Liesegang, R Cramm, ... Nature biotechnology 24 (10), 1257-1262, 2006 | 735 | 2006 |
The genome of Clostridium kluyveri, a strict anaerobe with unique metabolic features H Seedorf, WF Fricke, B Veith, H Brüggemann, H Liesegang, A Strittmatter, ... Proceedings of the National Academy of Sciences 105 (6), 2128-2133, 2008 | 518 | 2008 |
Complete genome sequence of the acetic acid bacterium Gluconobacter oxydans C Prust, M Hoffmeister, H Liesegang, A Wiezer, WF Fricke, A Ehrenreich, ... Nature biotechnology 23 (2), 195-200, 2005 | 503 | 2005 |
Multiple antimicrobial resistance in plague: an emerging public health risk TJ Welch, WF Fricke, PF McDermott, DG White, ML Rosso, DA Rasko, ... PloS one 2 (3), e309, 2007 | 472 | 2007 |
The genome sequence of Clostridium tetani, the causative agent of tetanus disease H Brüggemann, S Bäumer, WF Fricke, A Wiezer, H Liesegang, I Decker, ... Proceedings of the National Academy of Sciences 100 (3), 1316-1321, 2003 | 433 | 2003 |
Score-based prediction of genomic islands in prokaryotic genomes using hidden Markov models S Waack, O Keller, R Asper, T Brodag, C Damm, WF Fricke, K Surovcik, ... BMC bioinformatics 7, 1-12, 2006 | 416 | 2006 |
CloVR: a virtual machine for automated and portable sequence analysis from the desktop using cloud computing SV Angiuoli, M Matalka, A Gussman, K Galens, M Vangala, DR Riley, ... BMC bioinformatics 12, 1-15, 2011 | 373 | 2011 |
The Genome Sequence of Methanosphaera stadtmanae Reveals Why This Human Intestinal Archaeon Is Restricted to Methanol and H2 for Methane Formation … WF Fricke, H Seedorf, A Henne, M Krüer, H Liesegang, R Hedderich, ... Journal of bacteriology 188 (2), 642-658, 2006 | 352 | 2006 |
Proof of concept of microbiome-metabolome analysis and delayed gluten exposure on celiac disease autoimmunity in genetically at-risk infants M Sellitto, G Bai, G Serena, WF Fricke, C Sturgeon, P Gajer, JR White, ... PloS one 7 (3), e33387, 2012 | 339 | 2012 |
Microbiota Dynamics in Patients Treated with Fecal Microbiota Transplantation for Recurrent Clostridium difficile Infection Y Song, S Garg, M Girotra, C Maddox, EC Von Rosenvinge, A Dutta, ... PloS one 8 (11), e81330, 2013 | 257 | 2013 |
Comparative genomics of the IncA/C multidrug resistance plasmid family WF Fricke, TJ Welch, PF McDermott, MK Mammel, JE LeClerc, DG White, ... Journal of Bacteriology 191 (15), 4750-4757, 2009 | 239 | 2009 |
Colonization patterns of soil microbial communities in the Atacama Desert A Crits-Christoph, CK Robinson, T Barnum, WF Fricke, AF Davila, ... Microbiome 1, 1-13, 2013 | 228 | 2013 |
Natural transformation facilitates transfer of transposons, integrons and gene cassettes between bacterial species S Domingues, K Harms, WF Fricke, PJ Johnsen, GJ Da Silva, KM Nielsen Public Library of Science 8 (8), e1002837, 2012 | 227 | 2012 |
Antimicrobial Resistance-Conferring Plasmids with Similarity to Virulence Plasmids from Avian Pathogenic Escherichia coli Strains in Salmonella enterica Serovar … WF Fricke, PF McDermott, MK Mammel, S Zhao, TJ Johnson, DA Rasko, ... Applied and Environmental Microbiology 75 (18), 5963-5971, 2009 | 202 | 2009 |
Bacterial genome sequencing in the clinic: bioinformatic challenges and solutions WF Fricke, DA Rasko Nature Reviews Genetics 15 (1), 49-55, 2014 | 191 | 2014 |
Complex microbiome underlying secondary and primary metabolism in the tunicate-Prochloron symbiosis MS Donia, WF Fricke, F Partensky, J Cox, SI Elshahawi, JR White, ... Proceedings of the National Academy of Sciences 108 (51), E1423-E1432, 2011 | 180 | 2011 |
Comparative genomics of 28 Salmonella enterica isolates: evidence for CRISPR-mediated adaptive sublineage evolution WF Fricke, MK Mammel, PF McDermott, C Tartera, DG White, JE LeClerc, ... Journal of bacteriology 193 (14), 3556-3568, 2011 | 180 | 2011 |
The Complete Genome Sequence of Yersinia pseudotuberculosis IP31758, the Causative Agent of Far East Scarlet-Like Fever M Eppinger, MJ Rosovitz, WF Fricke, DA Rasko, G Kokorina, C Fayolle, ... PLoS genetics 3 (8), e142, 2007 | 180 | 2007 |
Human microbiota characterization in the course of renal transplantation WF Fricke, C Maddox, Y Song, JS Bromberg American Journal of Transplantation 14 (2), 416-427, 2014 | 175 | 2014 |