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Anthony Mathelier
Anthony Mathelier
Group Leader, Centre for Molecular Medicine Norway (NCMM), University of Oslo and Oslo University
Verified email at ncmm.uio.no - Homepage
Title
Cited by
Cited by
Year
A promoter-level mammalian expression atlas
Nature 507 (7493), 462-470, 2014
14452014
JASPAR 2018: update of the open-access database of transcription factor binding profiles and its web framework
A Khan, O Fornes, A Stigliani, M Gheorghe, JA Castro-Mondragon, ...
Nucleic acids research 46 (D1), D260-D266, 2018
13242018
JASPAR 2014: an extensively expanded and updated open-access database of transcription factor binding profiles
A Mathelier, X Zhao, AW Zhang, F Parcy, R Worsley-Hunt, DJ Arenillas, ...
Nucleic acids research 42 (D1), D142-D147, 2014
11172014
JASPAR 2020: update of the open-access database of transcription factor binding profiles
O Fornes, JA Castro-Mondragon, A Khan, R Van der Lee, X Zhang, ...
Nucleic acids research 48 (D1), D87-D92, 2020
10562020
JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles
A Mathelier, O Fornes, DJ Arenillas, C Chen, G Denay, J Lee, W Shi, ...
Nucleic acids research 44 (D1), D110-D115, 2016
10182016
An integrated expression atlas of miRNAs and their promoters in human and mouse
D De Rie, I Abugessaisa, T Alam, E Arner, P Arner, H Ashoor, G Ċström, ...
Nature biotechnology 35 (9), 872-878, 2017
3872017
Intervene: a tool for intersection and visualization of multiple gene or genomic region sets
A Khan, A Mathelier
BMC bioinformatics 18 (1), 1-8, 2017
2392017
The next generation of transcription factor binding site prediction
A Mathelier, WW Wasserman
PLoS computational biology 9 (9), e1003214, 2013
1972013
ReMap 2018: an updated atlas of regulatory regions from an integrative analysis of DNA-binding ChIP-seq experiments
J Chèneby, M Gheorghe, M Artufel, A Mathelier, B Ballester
Nucleic acids research 46 (D1), D267-D275, 2018
1832018
MIReNA: finding microRNAs with high accuracy and no learning at genome scale and from deep sequencing data
A Mathelier, A Carbone
Bioinformatics 26 (18), 2226-2234, 2010
1712010
MirGeneDB 2.0: the metazoan microRNA complement
B Fromm, D Domanska, E Hĝye, V Ovchinnikov, W Kang, ...
Nucleic Acids Research 48 (D1), D132-D141, 2020
165*2020
DNA shape features improve transcription factor binding site predictions in vivo
A Mathelier, B Xin, TP Chiu, L Yang, R Rohs, WW Wasserman
Cell systems 3 (3), 278-286. e4, 2016
1312016
TFBSshape: a motif database for DNA shape features of transcription factor binding sites
L Yang, T Zhou, I Dror, A Mathelier, WW Wasserman, R Gordân, R Rohs
Nucleic acids research 42 (D1), D148-D155, 2014
1282014
Identification of altered cis-regulatory elements in human disease
A Mathelier, W Shi, WW Wasserman
Trends in Genetics 31 (2), 67-76, 2015
1092015
JASPAR 2022: the 9th release of the open-access database of transcription factor binding profiles
JA Castro-Mondragon, R Riudavets-Puig, I Rauluseviciute, ...
Nucleic acids research 50 (D1), D165-D173, 2022
1052022
DNA methylation at enhancers identifies distinct breast cancer lineages
T Fleischer, X Tekpli, A Mathelier, S Wang, D Nebdal, HP Dhakal, ...
Nature Communications 8 (1), 1-14, 2017
912017
Update of the FANTOM web resource: high resolution transcriptome of diverse cell types in mammals
M Lizio, J Harshbarger, I Abugessaisa, S Noguchi, A Kondo, J Severin, ...
Nucleic acids research, gkw995, 2016
882016
Large scale chromosomal mapping of human microRNA structural clusters
A Mathelier, A Carbone
Nucleic acids research 41 (8), 4392-4408, 2013
662013
A map of direct TF-DNA interactions in the human genome
M Gheorghe, GK Sandve, A Khan, J Cheneby, B Ballester, A Mathelier
Nucleic Acids Research, gky1210, 2018
622018
Evaluating the impact of single nucleotide variants on transcription factor binding
W Shi, O Fornes, A Mathelier, WW Wasserman
Nucleic acids research 44 (21), 10106-10116, 2016
502016
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