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Sidney Walker
Sidney Walker
Verified email at ucc.ie
Title
Cited by
Cited by
Year
Sequence-based characterization of intratumoral bacteria—a guide to best practice
SP Walker, M Tangney, MJ Claesson
Frontiers in Oncology 10, 179, 2020
432020
Differential association of CD68+ and CD163+ macrophages with macrophage enzymes, whole tumour gene expression and overall survival in advanced …
LF Tremble, M McCabe, SP Walker, S McCarthy, RF Tynan, S Beecher, ...
British journal of cancer 123 (10), 1553-1561, 2020
402020
Non-specific amplification of human DNA is a major challenge for 16S rRNA gene sequence analysis
SP Walker, M Barrett, G Hogan, Y Flores Bueso, MJ Claesson, M Tangney
Scientific reports 10 (1), 16356, 2020
402020
Microbiome analysis as a platform R&D tool for parasitic nematode disease management
G Hogan, S Walker, F Turnbull, T Curiao, AA Morrison, Y Flores, ...
The ISME journal 13 (11), 2664-2680, 2019
212019
Arming yourself for the in silico protein design revolution
SP Walker, VVB Yallapragada, M Tangney
Trends in Biotechnology 39 (7), 651-664, 2021
162021
Characterization of FFPE-induced bacterial DNA damage and development of a repair method
Y Flores Bueso, SP Walker, M Tangney
Biology Methods and Protocols 5 (1), bpaa015, 2020
142020
Biopsy bacterial signature can predict patient tissue malignancy
G Hogan, J Eckenberger, N Narayanen, SP Walker, MJ Claesson, ...
Scientific Reports 11 (1), 18535, 2021
112021
Pepblock builder VR–an open-source tool for gaming-based bio-edutainment in interactive protein design
VVB Yallapragada, T Xu, SP Walker, S Tabirca, M Tangney
Frontiers in Bioengineering and Biotechnology 9, 674211, 2021
102021
Protoblock-A biological standard for formalin fixed samples
YF Bueso, SP Walker, G Hogan, MJ Claesson, M Tangney
Microbiome 8, 2020
102020
Function2Form Bridge—Toward synthetic protein holistic performance prediction
VVB Yallapragada, SP Walker, C Devoy, S Buckley, Y Flores, M Tangney
Proteins: Structure, Function, and Bioinformatics 88 (3), 462-475, 2020
52020
A novel cell permeability assay for macromolecules
Y Flores Bueso, S Walker, J Quinn, M Tangney
BMC Molecular and Cell Biology 21, 1-9, 2020
22020
Synthetic protein protease sensor platform
C Devoy, Y Flores Bueso, S Buckley, S Walker, M Tangney
Frontiers in Bioengineering and Biotechnology 12, 1347953, 2024
2024
Biopsy bacterial signature can predict patient tissue malignancy (vol 11, 18535, 2021)
G Hogan, J Eckenberger, N Narayanen, SP Walker, MJ Claesson, ...
SCIENTIFIC REPORTS 12 (1), 2022
2022
Author Correction: Biopsy bacterial signature can predict patient tissue malignancy
G Hogan, J Eckenberger, N Narayanen, SP Walker, MJ Claesson, ...
Scientific Reports 12, 2022
2022
Bioinformatic Platforms for Metagenomics
J Eckenberger, SP Walker, MJ Claesson
Elsevier, 2021
2021
Development of novel methodology for study of bacterial DNA from FFPE samples
YF Bueso, SP Walker, G Hogan, M Claesson, M Tangney
Bacterial inhabitants of tumours: methods for exploration and, 142, 2020
2020
Bacterial inhabitants of tumours: methods for exploration and exploitation
SP Walker
University College Cork, 2020
2020
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