Brook L. Nunn
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The Skyline ecosystem: Informatics for quantitative mass spectrometry proteomics
LK Pino, BC Searle, JG Bollinger, B Nunn, B MacLean, MJ MacCoss
Mass spectrometry reviews 39 (3), 229-244, 2020
Comparative metaproteomics reveals ocean-scale shifts in microbial nutrient utilization and energy transduction
RM Morris, BL Nunn, C Frazar, DR Goodlett, YS Ting, G Rocap
The ISME journal 4 (5), 673-685, 2010
Physiological responses of a Southern Ocean diatom to complex future ocean conditions
PW Boyd, PW Dillingham, CM McGraw, EA Armstrong, CE Cornwall, ...
Nature Climate Change 6 (2), 207-213, 2016
Metabolomics and proteomics reveal impacts of chemically mediated competition on marine plankton
KL Poulson-Ellestad, CM Jones, J Roy, MR Viant, FM Fernández, ...
Proceedings of the national academy of sciences 111 (24), 9009-9014, 2014
Shotgun proteomics reveals physiological response to ocean acidification in Crassostrea gigas
E Timmins-Schiffman, WD Coffey, W Hua, BL Nunn, GH Dickinson, ...
BMC genomics 15, 1-18, 2014
Detection of hydroxamate siderophores in coastal and Sub-Antarctic waters off the South Eastern Coast of New Zealand
I Velasquez, BL Nunn, E Ibisanmi, DR Goodlett, KA Hunter, SG Sander
Marine Chemistry 126 (1-4), 97-107, 2011
What is the oxygen exposure time of laterally transported organic matter along the Washington margin?
RG Keil, AF Dickens, T Arnarson, BL Nunn, AH Devol
Marine Chemistry 92 (1-4), 157-165, 2004
Diatom proteomics reveals unique acclimation strategies to mitigate Fe limitation
BL Nunn, JF Faux, AA Hippmann, MT Maldonado, HR Harvey, ...
PloS one 8 (10), e75653, 2013
Sulfur oxidizers dominate carbon fixation at a biogeochemical hot spot in the dark ocean
TE Mattes, BL Nunn, KT Marshall, G Proskurowski, DS Kelley, OE Kawka, ...
The ISME journal 7 (12), 2349-2360, 2013
Critical decisions in metaproteomics: achieving high confidence protein annotations in a sea of unknowns
E Timmins-Schiffman, DH May, M Mikan, M Riffle, C Frazar, HR Harvey, ...
The ISME journal 11 (2), 309-314, 2017
Progress and challenges in ocean metaproteomics and proposed best practices for data sharing
MA Saito, EM Bertrand, ME Duffy, DA Gaylord, NA Held, WJ Hervey IV, ...
Journal of proteome research 18 (4), 1461-1476, 2019
Deciphering diatom biochemical pathways via whole-cell proteomics
BL Nunn, JR Aker, SA Shaffer, Y Tsai, RF Strzepek, PW Boyd, ...
Aquatic Microbial Ecology 55 (3), 241-253, 2009
MetaGOmics: a web-based tool for peptide-centric functional and taxonomic analysis of metaproteomics data
M Riffle, DH May, E Timmins-Schiffman, MP Mikan, D Jaschob, WS Noble, ...
Proteomes 6 (1), 2, 2017
Tandem mass spectrometry investigation of ADP-ribosylated kemptide
SM Hengel, SA Shaffer, BL Nunn, DR Goodlett
Journal of the American Society for Mass Spectrometry 20 (3), 477-483, 2011
An alignment-free “metapeptide” strategy for metaproteomic characterization of microbiome samples using shotgun metagenomic sequencing
DH May, E Timmins-Schiffman, MP Mikan, HR Harvey, E Borenstein, ...
Journal of proteome research 15 (8), 2697-2705, 2016
Identifying and tracking proteins through the marine water column: Insights into the inputs and preservation mechanisms of protein in sediments
EK Moore, BL Nunn, DR Goodlett, HR Harvey
Geochimica et cosmochimica acta 83, 324-359, 2012
Marine proteomics
BL Nunn, AT Timperman
Marine Ecology Progress Series 332, 281-289, 2007
Proteomics of Colwellia psychrerythraea at subzero temperatures – a life with limited movement, flexible membranes and vital DNA repair
BL Nunn, KV Slattery, KA Cameron, E Timmins‐Schiffman, K Junge
Environmental microbiology 17 (7), 2319-2335, 2015
Disseminating metaproteomic informatics capabilities and knowledge using the Galaxy-P framework
C Blank, C Easterly, B Gruening, J Johnson, CA Kolmeder, P Kumar, ...
Proteomes 6 (1), 7, 2018
Acquisition of Iron by Alkaliphilic Bacillus Species
DGG McMillan, I Velasquez, BL Nunn, DR Goodlett, KA Hunter, I Lamont, ...
Applied and Environmental Microbiology 76 (20), 6955-6961, 2010
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