Sofia K. Forslund

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Peer BorkDirector of EMBL HeidelbergVerifisert e-postadresse på embl.de
Jaime Huerta-CepasGroup Leader at CBGP (UPM-INIA-CSIC), Madrid, SpainVerifisert e-postadresse på embl.de
Christian von MeringProfessor of Computational Biology, University of Zurich and Swiss Institute of BioinformaticsVerifisert e-postadresse på imls.uzh.ch
Damian SzklarczykSIB Swiss Institute of Bioinformatics / University of ZurichVerifisert e-postadresse på isb-sib.ch
Lars Juhl JensenUniversity of CopenhagenVerifisert e-postadresse på cpr.ku.dk
Shinichi SunagawaETH Zurich; Swiss Institute of BioinformaticsVerifisert e-postadresse på ethz.ch
Michael Kuhnresearch staff scientist & research coordinator in the lab of Peer Bork, EMBLVerifisert e-postadresse på embl.de
Alex BatemanHead of Protein Sequence Resources, EMBL-EBIVerifisert e-postadresse på ebi.ac.uk
Robert D. FinnMicrobiome Informatics Team Leader, EMBL-EBI, Wellcome Trust Genome Campus, Hinxton, Cambs, CB10 1SDVerifisert e-postadresse på ebi.ac.uk
Daniel R. MendeAsst. Professor, Amsterdam University Medical Center, University of AmsterdamVerifisert e-postadresse på amsterdamumc.nl
Alexander RothUniversity of ZurichVerifisert e-postadresse på uzh.ch
Jens Roat KultimaDanish Competition and Consumer Agency; Bioinformatics and Economic Fraud SpecialistVerifisert e-postadresse på kfst.dk
Manimozhiyan ArumugamAssociate Professor, Faculty of Health and Medical Sciences, University of CopenhagenVerifisert e-postadresse på sund.ku.dk
Toni GabaldonGroup Leader, Institute for Research in Biomedicine (IRB), Barcelona Supercomputing Centre (BSC)Verifisert e-postadresse på crg.es
Chris CreeveyProfessor of Computational Biology, Queen’s University BelfastVerifisert e-postadresse på qub.ac.uk
Barbara HollandSchool of Natural Sciences (Maths), University of Tasmania, HobartVerifisert e-postadresse på utas.edu.au
Korbinian StrimmerDepartment of Mathematics, The University of ManchesterVerifisert e-postadresse på manchester.ac.uk
Dr. Fabian SchreiberMedical Data Scientist, Charite BerlinVerifisert e-postadresse på charite.de
Daniel H. HusonProfessor of Algorithms in Bioinformatics, University of TuebingenVerifisert e-postadresse på uni-tuebingen.de

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Sofia K. Forslund

Junior Group Leader, ECRC (joint Max Delbrück Center and Charité University Hospital unit), Berlin

Verifisert e-postadresse på embl.de - Startside

Cardiovascular and metabolic disease systems medicine evolutionary bioinformatics host-microbiome analysis antibiotic resist


Tittel Sorter etter sitater Sorter etter år Sorter etter tittel	Sitert av Sitert av	År
STRING v11: protein–protein association networks with increased coverage, supporting functional discovery in genome-wide experimental datasets D Szklarczyk, AL Gable, D Lyon, A Junge, S Wyder, J Huerta-Cepas, ... Nucleic acids research 47 (D1), D607-D613, 2019	12910	2019
The Pfam protein families database M Punta, PC Coggill, RY Eberhardt, J Mistry, J Tate, C Boursnell, N Pang, ... Nucleic acids research 40 (D1), D290-D301, 2012	10454*	2012
STRING v10: protein–protein interaction networks, integrated over the tree of life D Szklarczyk, A Franceschini, S Wyder, K Forslund, D Heller, ... Nucleic acids research 43 (D1), D447-D452, 2015	9668	2015
eggNOG 5.0: a hierarchical, functionally and phylogenetically annotated orthology resource based on 5090 organisms and 2502 viruses J Huerta-Cepas, D Szklarczyk, D Heller, A Hernández-Plaza, SK Forslund, ... Nucleic acids research 47 (D1), D309-D314, 2019	2336	2019
Fast genome-wide functional annotation through orthology assignment by eggNOG-mapper J Huerta-Cepas, K Forslund, LP Coelho, D Szklarczyk, LJ Jensen, ... Molecular biology and evolution 34 (8), 2115-2122, 2017	2002	2017
Disentangling type 2 diabetes and metformin treatment signatures in the human gut microbiota K Forslund, F Hildebrand, T Nielsen, G Falony, E Le Chatelier, ... Nature 528 (7581), 262-266, 2015	1858	2015
eggNOG 4.5: a hierarchical orthology framework with improved functional annotations for eukaryotic, prokaryotic and viral sequences J Huerta-Cepas, D Szklarczyk, K Forslund, H Cook, D Heller, MC Walter, ... Nucleic acids research 44 (D1), D286-D293, 2016	1834	2016
Human gut microbes impact host serum metabolome and insulin sensitivity HK Pedersen, V Gudmundsdottir, HB Nielsen, T Hyotylainen, T Nielsen, ... Nature 535 (7612), 376-381, 2016	1636	2016
Structure and function of the global topsoil microbiome M Bahram, F Hildebrand, SK Forslund, JL Anderson, NA Soudzilovskaia, ... Nature 560 (7717), 233-237, 2018	1401	2018
Salt-responsive gut commensal modulates T_H17 axis and disease N Wilck, MG Matus, SM Kearney, SW Olesen, K Forslund, ... Nature 551 (7682), 585-589, 2017	1009	2017
InParanoid 7: new algorithms and tools for eukaryotic orthology analysis G Östlund, T Schmitt, K Forslund, T Köstler, DN Messina, S Roopra, ... Nucleic acids research 38 (suppl_1), D196-D203, 2010	699	2010
Intestinal microbiome is related to lifetime antibiotic use in Finnish pre-school children K Korpela, A Salonen, LJ Virta, RA Kekkonen, K Forslund, P Bork, ... Nature communications 7 (1), 10410, 2016	663	2016
eggNOG v4. 0: nested orthology inference across 3686 organisms S Powell, K Forslund, D Szklarczyk, K Trachana, A Roth, J Huerta-Cepas, ... Nucleic acids research 42 (D1), D231-D239, 2014	559	2014
Recovery of gut microbiota of healthy adults following antibiotic exposure A Palleja, KH Mikkelsen, SK Forslund, A Kashani, KH Allin, T Nielsen, ... Nature microbiology 3 (11), 1255-1265, 2018	530	2018
Short-chain fatty acid propionate protects from hypertensive cardiovascular damage H Bartolomaeus, A Balogh, M Yakoub, S Homann, L Markó, S Höges, ... Circulation 139 (11), 1407-1421, 2019	496	2019
Metagenomic species profiling using universal phylogenetic marker genes S Sunagawa, DR Mende, G Zeller, F Izquierdo-Carrasco, SA Berger, ... Nature methods 10 (12), 1196-1199, 2013	485	2013
Country-specific antibiotic use practices impact the human gut resistome K Forslund, S Sunagawa, JR Kultima, DR Mende, M Arumugam, A Typas, ... Genome research 23 (7), 1163-1169, 2013	421	2013
Propionic acid shapes the multiple sclerosis disease course by an immunomodulatory mechanism A Duscha, B Gisevius, S Hirschberg, N Yissachar, GI Stangl, E Eilers, ... Cell 180 (6), 1067-1080. e16, 2020	357	2020
Statin therapy is associated with lower prevalence of gut microbiota dysbiosis S Vieira-Silva, G Falony, E Belda, T Nielsen, J Aron-Wisnewsky, ... Nature 581 (7808), 310-315, 2020	286	2020
Similarity of the dog and human gut microbiomes in gene content and response to diet LP Coelho, JR Kultima, PI Costea, C Fournier, Y Pan, ... Microbiome 6 (1), 1-11, 2018	233	2018

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