Raja Sekhar Nirujogi

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Akhilesh Pandey, M.D., Ph.D.Professor, Laboratory Medicine and Pathology, Mayo Clinic, Rochester, MinnesotaVerified email at mayo.edu
Dr. T. S. Keshava PrasadYenepoya (Deemed to be University), MangaloreVerified email at yenepoya.edu.in
Harsha GowdaQIMR Berghofer Medical Research InstituteVerified email at qimrberghofer.edu.au
Santosh Renuse, Ph.D.Assistant Professor, Laboratory Medicine and Pathology, Mayo Clinic, Rochester, MinnesotaVerified email at mayo.edu
Sneha M. PintoCenter for Molecular Inflammation Research (CEMIR), NTNU; Center for Systems Biology and MolecularVerified email at ntnu.no
Srikanth S. MandaData Scientist, Computational Proteomics, Cancer Data Science, CMRIVerified email at cmri.org.au
Min-Sik Kim, Ph.D.Department of New Biology, DGISTVerified email at dgist.ac.kr
Dario AlessiMRC Protein Phosphorylation and Ubiquitylation Units, University of DundeeVerified email at dundee.ac.uk
Aditi ChatterjeeInsitute of BioinformaticsVerified email at ibioinformatics.org
Dhanashree Kelkar SIndian institute of science education and researchVerified email at iiserpune.ac.in
Raghothama ChaerkadyAstraZenecaVerified email at astrazeneca.com
Tai-Chung Huang, MD, PhDNational Taiwan University HospitalVerified email at ntu.edu.tw
Chan Hyun NaDepartment of Neurology, Institute for Cell Engineering, Johns Hopkins University School of MedicineVerified email at jhmi.edu
Harsh Pawar, Ph.D.Faculty of Biology, TechnionVerified email at technion.ac.il
Richard L HuganirProfessor of Neuroscience, Johns Hopkins University School of MedicineVerified email at jhmi.edu
Graham H. DieringAssistant professor Cell Biology and Physiology, University of North CarolinaVerified email at med.unc.edu
Saddiq ZahariUCSFVerified email at ucsf.edu
Jun ZhongMayo ClinicVerified email at mayo.edu

Raja Sekhar Nirujogi

MRC- Protein Phosphorylation and Ubiquitylation Unit, University of Dundee, Dundee, UK

Verified email at dundee.ac.uk - Homepage

Cell Signaling and Proteomics


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A draft map of the human proteome MS Kim, SM Pinto, D Getnet, RS Nirujogi, SS Manda, R Chaerkady, ... Nature 509 (7502), 575-581, 2014	2075	2014
NetPath: a public resource of curated signal transduction pathways Genome Biology 12 (10), 10.1186/gb-2010-11-1-r3., 2010	471*	2010
Homer1a drives homeostatic scaling-down of excitatory synapses during sleep GH Diering, RS Nirujogi, RH Roth, PF Worley, A Pandey, RL Huganir Science 355 (6324), 511-515, 2017	378	2017
Systematic proteomic analysis of LRRK2-mediated Rab GTPase phosphorylation establishes a connection to ciliogenesis M Steger, F Diez, HS Dhekne, P Lis, RS Nirujogi, O Karayel, F Tonelli, ... elife 6, e31012, 2017	271	2017
Loss of C9orf72 enhances autophagic activity via deregulated mTOR and TFEB signaling J Ugolino, YJ Ji, K Conchina, J Chu, RS Nirujogi, A Pandey, NR Brady, ... PLoS genetics 12 (11), e1006443, 2016	146	2016
Proteomic analysis of human follicular fluid: a new perspective towards understanding folliculogenesis AS Ambekar, RS Nirujogi, SM Srikanth, S Chavan, DS Kelkar, I Hinduja, ... Journal of proteomics 87, 68-77, 2013	126	2013
Proteomic analysis of human osteoarthritis synovial fluid L Balakrishnan, RS Nirujogi, S Ahmad, M Bhattacharjee, SS Manda, ... Clinical proteomics 11 (1), 1-13, 2014	116	2014
Identification of long-lived synaptic proteins by proteomic analysis of synaptosome protein turnover S Heo, GH Diering, CH Na, RS Nirujogi, JL Bachman, A Pandey, ... Proceedings of the National Academy of Sciences 115 (16), E3827-E3836, 2018	100	2018
Differential proteomic analysis of synovial fluid from rheumatoid arthritis and osteoarthritis patients L Balakrishnan, M Bhattacharjee, S Ahmad, RS Nirujogi, S Renuse, ... Clinical proteomics 11 (1), 1-14, 2014	95	2014
Ubiquilin 2 modulates ALS/FTD-linked FUS–RNA complex dynamics and stress granule formation EJ Alexander, A Ghanbari Niaki, T Zhang, J Sarkar, Y Liu, RS Nirujogi, ... Proceedings of the National Academy of Sciences 115 (49), E11485-E11494, 2018	75	2018
SILAC‐based quantitative proteomic analysis of gastric cancer secretome A Marimuthu, Y Subbannayya, NA Sahasrabuddhe, L Balakrishnan, ... PROTEOMICS–Clinical Applications 7 (5-6), 355-366, 2013	68	2013
Quantitative phosphoproteomic analysis of IL‐33‐mediated signaling SM Pinto, RS Nirujogi, PL Rojas, AH Patil, SS Manda, Y Subbannayya, ... Proteomics 15 (2-3), 532-544, 2015	63	2015
Activation of diverse signalling pathways by oncogenic PIK3CA mutations. PA Wu X, Renuse S, Sahasrabuddhe NA, Zahari MS, Chaerkady R, Kim MS ... Nature Communications 2014 (5:4961), 0	63*
A proteogenomic analysis of Anopheles gambiae using high-resolution Fourier transform mass spectrometry R Chaerkady, DS Kelkar, B Muthusamy, K Kandasamy, SB Dwivedi, ... Genome research 21 (11), 1872-1881, 2011	61	2011
PPM1H phosphatase counteracts LRRK2 signaling by selectively dephosphorylating Rab proteins K Berndsen, P Lis, WM Yeshaw, PS Wawro, RS Nirujogi, M Wightman, ... Elife 8, e50416, 2019	56	2019
A proteogenomic approach to map the proteome of an unsequenced pathogen – Leishmania donovani H Pawar, NA Sahasrabuddhe, S Renuse, S Keerthikumar, J Sharma, ... Proteomics 12 (6), 832-844, 2012	51	2012
Integrating transcriptomic and proteomic data for accurate assembly and annotation of genomes TSK Prasad, AK Mohanty, M Kumar, SK Sreenivasamurthy, G Dey, ... Genome research 27 (1), 133-144, 2017	49	2017
Proteomics of human aqueous humor KR Murthy, P Rajagopalan, SM Pinto, J Advani, PR Murthy, R Goel, ... Omics: a journal of integrative biology 19 (5), 283-293, 2015	49	2015
Differential signaling through p190 and p210 BCR-ABL fusion proteins revealed by interactome and phosphoproteome analysis JA Cutler, R Tahir, SK Sreenivasamurthy, C Mitchell, S Renuse, ... Leukemia 31 (7), 1513-1524, 2017	48	2017
Proteogenomic Analysis of Candida glabrata using High Resolution Mass Spectrometry TSK Prasad, HC Harsha, S Keerthikumar, NR Sekhar, LDN Selvan, ... Journal of proteome research 11 (1), 247-260, 2012	46	2012

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