An Arabidopsis gene regulatory network for secondary cell wall synthesis M Taylor-Teeples, L Lin, M De Lucas, G Turco, TW Toal, A Gaudinier, ... Nature 517 (7536), 571-575, 2015 | 709 | 2015 |
Predictive behavior within microbial genetic networks I Tagkopoulos, YC Liu, S Tavazoie science 320 (5881), 1313-1317, 2008 | 491 | 2008 |
Benzalkonium chlorides: uses, regulatory status, and microbial resistance B Merchel Piovesan Pereira, I Tagkopoulos Applied and environmental microbiology 85 (13), e00377-19, 2019 | 373 | 2019 |
From vital signs to clinical outcomes for patients with sepsis: a machine learning basis for a clinical decision support system E Gultepe, JP Green, H Nguyen, J Adams, T Albertson, I Tagkopoulos Journal of the American Medical Informatics Association 21 (2), 315-325, 2014 | 230 | 2014 |
Evolutionary potential, cross‐stress behavior and the genetic basis of acquired stress resistance in Escherichia coli M Dragosits, V Mozhayskiy, S Quinones‐Soto, J Park, I Tagkopoulos Molecular systems biology 9 (1), 643, 2013 | 188 | 2013 |
Multi-omics integration accurately predicts cellular state in unexplored conditions for Escherichia coli M Kim, N Rai, V Zorraquino, I Tagkopoulos Nature communications 7 (1), 13090, 2016 | 163 | 2016 |
Transcriptional network analysis identifies BACH1 as a master regulator of breast cancer bone metastasis Y Liang, H Wu, R Lei, RA Chong, Y Wei, X Lu, I Tagkopoulos, SY Kung, ... Journal of Biological Chemistry 287 (40), 33533-33544, 2012 | 146 | 2012 |
From data to optimal decision making: a data-driven, probabilistic machine learning approach to decision support for patients with sepsis A Tsoukalas, T Albertson, I Tagkopoulos JMIR medical informatics 3 (1), e3445, 2015 | 125 | 2015 |
Data integration and predictive modeling methods for multi-omics datasets M Kim, I Tagkopoulos Molecular omics 14 (1), 8-25, 2018 | 102 | 2018 |
An integrative, multi‐scale, genome‐wide model reveals the phenotypic landscape of Escherichia coli J Carrera, R Estrela, J Luo, N Rai, A Tsoukalas, I Tagkopoulos Molecular systems biology 10 (7), 735, 2014 | 102 | 2014 |
Application of machine learning in rheumatic disease research KJ Kim, I Tagkopoulos The Korean journal of internal medicine 34 (4), 708, 2019 | 97 | 2019 |
Biocide-Induced Emergence of Antibiotic Resistance in Escherichia coli B Merchel Piovesan Pereira, X Wang, I Tagkopoulos Frontiers in Microbiology 12, 640923, 2021 | 84 | 2021 |
Predicting early risk of chronic kidney disease in cats using routine clinical laboratory tests and machine learning R Bradley, I Tagkopoulos, M Kim, Y Kokkinos, T Panagiotakos, J Kennedy, ... Journal of veterinary internal medicine 33 (6), 2644-2656, 2019 | 64 | 2019 |
A synthetic biology approach to self-regulatory recombinant protein production in Escherichia coli M Dragosits, D Nicklas, I Tagkopoulos Journal of biological engineering 6, 1-10, 2012 | 61 | 2012 |
SBROME: a scalable optimization and module matching framework for automated biosystems design L Huynh, A Tsoukalas, M Köppe, I Tagkopoulos ACS synthetic biology 2 (5), 263-273, 2013 | 55 | 2013 |
Kinetic characterization of 100 glycoside hydrolase mutants enables the discovery of structural features correlated with kinetic constants DA Carlin, RW Caster, X Wang, SA Betzenderfer, CX Chen, VM Duong, ... PLoS One 11 (1), e0147596, 2016 | 54 | 2016 |
The Genetic and Transcriptional Basis of Short and Long Term Adaptation across Multiple Stresses in Escherichia coli V Zorraquino, M Kim, N Rai, I Tagkopoulos Molecular Biology and Evolution 34 (3), 707-717, 2017 | 52 | 2017 |
Preliminary techno-economic assessment of animal cell-based meat D Risner, F Li, JS Fell, SA Pace, JB Siegel, I Tagkopoulos, ES Spang Foods 10 (1), 3, 2020 | 43 | 2020 |
The computational diet: a review of computational methods across diet, microbiome, and health A Eetemadi, N Rai, BMP Pereira, M Kim, H Schmitz, I Tagkopoulos Frontiers in microbiology 11, 393, 2020 | 40 | 2020 |
Compendium of skin molecular signatures identifies key pathological features associated with fibrosis in systemic sclerosis SJ Moon, JM Bae, KS Park, I Tagkopoulos, KJ Kim Annals of the Rheumatic Diseases 78 (6), 817-825, 2019 | 38 | 2019 |