Eric E. Allen
Eric E. Allen
Professor of Marine Biology, University of California San Diego
Verifisert e-postadresse på ucsd.edu
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Community structure and metabolism through reconstruction of microbial genomes from the environment
GW Tyson, J Chapman, P Hugenholtz, EE Allen, RJ Ram, PM Richardson, ...
Nature 428 (6978), 37-43, 2004
23412004
The genome of a motile marine Synechococcus
B Palenik, B Brahamsha, FW Larimer, M Land, L Hauser, P Chain, ...
Nature 424 (6952), 1037-1042, 2003
6812003
The Marine Microbial Eukaryote Transcriptome Sequencing Project (MMETSP): illuminating the functional diversity of eukaryotic life in the oceans through transcriptome sequencing
PJ Keeling, F Burki, HM Wilcox, B Allam, EE Allen, LA Amaral-Zettler, ...
PLoS Biol 12 (6), e1001889, 2014
5802014
The yeast genome directory
AEA Goffeau, R Aert, ML Agostini-Carbone, A Ahmed, M Aigle, ...
Nature 387 (6632), 5-6, 1997
4771997
Complete mitochondrial genome phylogeographic analysis of killer whales (Orcinus orca) indicates multiple species
PA Morin, FI Archer, AD Foote, J Vilstrup, EE Allen, P Wade, J Durban, ...
Genome research 20 (7), 908-916, 2010
3802010
Community cyberinfrastructure for advanced microbial ecology research and analysis: the CAMERA resource
S Sun, J Chen, W Li, I Altintas, A Lin, S Peltier, K Stocks, EE Allen, ...
Nucleic acids research 39 (suppl_1), D546-D551, 2010
3562010
The natural product domain seeker NaPDoS: a phylogeny based bioinformatic tool to classify secondary metabolite gene diversity
N Ziemert, S Podell, K Penn, JH Badger, E Allen, PR Jensen
PloS one 7 (3), e34064, 2012
2842012
De novo metagenomic assembly reveals abundant novel major lineage of Archaea in hypersaline microbial communities
P Narasingarao, S Podell, JA Ugalde, C Brochier-Armanet, JB Emerson, ...
The ISME journal 6 (1), 81-93, 2012
2712012
Genome-directed isolation of the key nitrogen fixer Leptospirillum ferrodiazotrophum sp. nov. from an acidophilic microbial community
GW Tyson, I Lo, BJ Baker, EE Allen, P Hugenholtz, JF Banfield
Applied and environmental microbiology 71 (10), 6319-6324, 2005
2532005
Strain-resolved community proteomics reveals recombining genomes of acidophilic bacteria
I Lo, VJ Denef, NC VerBerkmoes, MB Shah, D Goltsman, G DiBartolo, ...
Nature 446 (7135), 537-541, 2007
2442007
Community genomics in microbial ecology and evolution
EE Allen, JF Banfield
Nature reviews microbiology 3 (6), 489-498, 2005
2412005
Monounsaturated but not polyunsaturated fatty acids are required for growth of the deep-sea bacteriumPhotobacterium profundum SS9 at high pressure and low temperature
EE Allen, D Facciotti, DH Bartlett
Applied and Environmental Microbiology 65 (4), 1710-1720, 1999
2301999
Structure and regulation of the omega-3 polyunsaturated fatty acid synthase genes from the deep-sea bacterium Photobacterium profundum strain SS9The GenBank accession numbers …
EE Allen, DH Bartlett
Microbiology 148 (6), 1903-1913, 2002
2002002
Lineages of acidophilic archaea revealed by community genomic analysis
BJ Baker, GW Tyson, RI Webb, J Flanagan, P Hugenholtz, EE Allen, ...
Science 314 (5807), 1933-1935, 2006
1932006
Biosynthesis of polybrominated aromatic organic compounds by marine bacteria
V Agarwal, AA El Gamal, K Yamanaka, D Poth, RD Kersten, M Schorn, ...
Nature chemical biology 10 (8), 640-647, 2014
1742014
Genomic islands link secondary metabolism to functional adaptation in marine Actinobacteria
K Penn, C Jenkins, M Nett, DW Udwary, EA Gontang, RP McGlinchey, ...
The ISME journal 3 (10), 1193-1203, 2009
1702009
Genome dynamics in a natural archaeal population
EE Allen, GW Tyson, RJ Whitaker, JC Detter, PM Richardson, JF Banfield
Proceedings of the National Academy of Sciences 104 (6), 1883-1888, 2007
1392007
Metabolic versatility of the Riftia pachyptila endosymbiont revealed through metagenomics
JC Robidart, SR Bench, RA Feldman, A Novoradovsky, SB Podell, ...
Environmental Microbiology 10 (3), 727-737, 2008
1232008
Compositional differences in particle‐associated and free‐living microbial assemblages from an extreme deep‐ocean environment
EA Eloe, CN Shulse, DW Fadrosh, SJ Williamson, EE Allen, DH Bartlett
Environmental microbiology reports 3 (4), 449-458, 2011
1192011
Characterization of cyanobacterial hydrocarbon composition and distribution of biosynthetic pathways
RC Coates, S Podell, A Korobeynikov, A Lapidus, P Pevzner, ...
PLOS one 9 (1), e85140, 2014
1102014
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