Pavel Tomancak

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Stephan PreibischHHMI Janelia Research CampusVerifisert e-postadresse på janelia.hhmi.org
Stephan SaalfeldHHMI Janelia Research CampusVerifisert e-postadresse på janelia.hhmi.org
Johannes SchindelinVerifisert e-postadresse på wisc.edu
Albert CardonaMRC LMB and University of CambridgeVerifisert e-postadresse på mrc-lmb.cam.ac.uk
Jean-Yves TinevezInstitut Pasteur, Paris, FranceVerifisert e-postadresse på pasteur.fr
Florian JugFondazione Human TechnopoleVerifisert e-postadresse på fht.org
Gerald M. RubinJanelia Research Campus/HHMIVerifisert e-postadresse på janelia.hhmi.org
Gene MyersMax-Planck Institute for Molecular Cell Biology & GeneticsVerifisert e-postadresse på mpi-cbg.de
Jan HuiskenGeorg-August-University GöttingenVerifisert e-postadresse på uni-goettingen.de
Stephan W GrillMax Planck Institute of Molecular Cell Biology and GeneticsVerifisert e-postadresse på mpi-cbg.de
Anastasios PavlopoulosInstitute of Molecular Biology and Biotechnology (IMBB-FORTH)Verifisert e-postadresse på imbb.forth.gr
Uwe OhlerProfessor, Max-Delbruck-Center & Humboldt University Berlin / Adjunct Professor, Duke UniversityVerifisert e-postadresse på mdc-berlin.de
Benjamin P BermanAssociate Professor, The Hebrew University of Jerusalem School of MedicineVerifisert e-postadresse på mail.huji.ac.il
Helena JamborTU Dresden (DE) & University of Applied Sciences of the Grisons (CH)Verifisert e-postadresse på tu-dresden.de
Caren NordenVerifisert e-postadresse på igc.gulbenkian.pt
Radoslaw Kamil EjsmontCRI, Paris, FranceVerifisert e-postadresse på cri-paris.org
Mihail SarovHead of Genome Engineering, Max Planck Institute of Molecular Cell Biology and GeneticsVerifisert e-postadresse på mpi-cbg.de
Iva KelavaSenior staff scientist at Welcome Sanger InstituteVerifisert e-postadresse på sanger.ac.uk
Simon AlbertiTechnische Universität DresdenVerifisert e-postadresse på tu-dresden.de
AA HymanMax Planck institute of molecular cell biology and geneticsVerifisert e-postadresse på mpi-cbg.de

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Pavel Tomancak

Research Group Leader at the Max Planck Institute of Molecular Cell Biology and Genetics in Dresden

Verifisert e-postadresse på mpi-cbg.de - Startside

evolutionary biology developmental biology imaging image analysis


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Fiji: an open-source platform for biological-image analysis J Schindelin, I Arganda-Carreras, E Frise, V Kaynig, M Longair, T Pietzsch, ... Nature methods 9 (7), 676-682, 2012	61974	2012
Globally optimal stitching of tiled 3D microscopic image acquisitions S Preibisch, S Saalfeld, P Tomancak Bioinformatics 25 (11), 1463-1465, 2009	2611	2009
Content-aware image restoration: pushing the limits of fluorescence microscopy M Weigert, U Schmidt, T Boothe, A Müller, A Dibrov, A Jain, B Wilhelm, ... Nature methods 15 (12), 1090-1097, 2018	1139	2018
Global analysis of mRNA localization reveals a prominent role in organizing cellular architecture and function E Lécuyer, H Yoshida, N Parthasarathy, C Alm, T Babak, T Cerovina, ... Cell 131 (1), 174-187, 2007	1130	2007
RNA buffers the phase separation behavior of prion-like RNA binding proteins S Maharana, J Wang, DK Papadopoulos, D Richter, A Pozniakovsky, ... Science 360 (6391), 918-921, 2018	1030	2018
TrakEM2 software for neural circuit reconstruction A Cardona, S Saalfeld, J Schindelin, I Arganda-Carreras, S Preibisch, ... PloS one 7 (6), e38011, 2012	1017	2012
Computational identification of DrosophilamicroRNA genes EC Lai, P Tomancak, RW Williams, GM Rubin Genome biology 4, 1-20, 2003	1013	2003
Systematic determination of patterns of gene expression during Drosophila embryogenesis P Tomancak, A Beaton, R Weiszmann, E Kwan, SQ Shu, SE Lewis, ... Genome biology 3, 1-14, 2002	847	2002
Exploiting transcription factor binding site clustering to identify cis-regulatory modules involved in pattern formation in the Drosophila genome BP Berman, Y Nibu, BD Pfeiffer, P Tomancak, SE Celniker, M Levine, ... Proceedings of the National Academy of Sciences 99 (2), 757-762, 2002	773	2002
Biological imaging software tools KW Eliceiri, MR Berthold, IG Goldberg, L Ibáñez, BS Manjunath, ... Nature methods 9 (7), 697-710, 2012	647	2012
An objective comparison of cell-tracking algorithms V Ulman, M Maška, KEG Magnusson, O Ronneberger, C Haubold, ... Nature methods 14 (12), 1141-1152, 2017	619	2017
Tissue clearing and its applications in neuroscience HR Ueda, A Ertürk, K Chung, V Gradinaru, A Chédotal, P Tomancak, ... Nature Reviews Neuroscience 21 (2), 61-79, 2020	554	2020
Global analysis of patterns of gene expression during Drosophilaembryogenesis P Tomancak, BP Berman, A Beaton, R Weiszmann, E Kwan, ... Genome biology 8, 1-24, 2007	553	2007
Gene expression divergence recapitulates the developmental hourglass model AT Kalinka, KM Varga, DT Gerrard, S Preibisch, DL Corcoran, J Jarrells, ... Nature 468 (7325), 811-814, 2010	496	2010
Software for bead-based registration of selective plane illumination microscopy data S Preibisch, S Saalfeld, J Schindelin, P Tomancak Nature methods 7 (6), 418-419, 2010	471	2010
Assessing phototoxicity in live fluorescence imaging PP Laissue, RA Alghamdi, P Tomancak, EG Reynaud, H Shroff Nature methods 14 (7), 657-661, 2017	461	2017
An Integrated Micro- and Macroarchitectural Analysis of the Drosophila Brain by Computer-Assisted Serial Section Electron Microscopy A Cardona, S Saalfeld, S Preibisch, B Schmid, A Cheng, J Pulokas, ... PLoS biology 8 (10), e1000502, 2010	442	2010
CATMAID: collaborative annotation toolkit for massive amounts of image data S Saalfeld, A Cardona, V Hartenstein, P Tomančák Bioinformatics 25 (15), 1984-1986, 2009	393	2009
OpenSPIM: an open-access light-sheet microscopy platform PG Pitrone, J Schindelin, L Stuyvenberg, S Preibisch, M Weber, ... Nature methods 10 (7), 598-599, 2013	388	2013
A genome-wide resource for the analysis of protein localisation in Drosophila M Sarov, C Barz, H Jambor, MY Hein, C Schmied, D Suchold, B Stender, ... elife 5, e12068, 2016	361	2016

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