Label-free prediction of three-dimensional fluorescence images from transmitted-light microscopy C Ounkomol, S Seshamani, MM Maleckar, F Collman, GR Johnson Nature methods 15 (11), 917-920, 2018 | 522 | 2018 |
Single-cell transcriptomic evidence for dense intracortical neuropeptide networks SJ Smith, U Sümbül, LT Graybuck, F Collman, S Seshamani, R Gala, ... elife 8, e47889, 2019 | 119 | 2019 |
Assessment of Crohn’s disease lesions in wireless capsule endoscopy images R Kumar, Q Zhao, S Seshamani, G Mullin, G Hager, T Dassopoulos IEEE Transactions on biomedical engineering 59 (2), 355-362, 2011 | 105 | 2011 |
A unified approach to diffusion direction sensitive slice registration and 3-D DTI reconstruction from moving fetal brain anatomy M Fogtmann, S Seshamani, C Kroenke, X Cheng, T Chapman, J Wilm, ... IEEE transactions on medical imaging 33 (2), 272-289, 2013 | 102 | 2013 |
Oligodendrocyte precursor cells ingest axons in the mouse neocortex JA Buchanan, L Elabbady, F Collman, NL Jorstad, TE Bakken, C Ott, ... Proceedings of the National Academy of Sciences 119 (48), e2202580119, 2022 | 86 | 2022 |
Real-time endoscopic mosaicking S Seshamani, W Lau, G Hager Medical Image Computing and Computer-Assisted Intervention–MICCAI 2006: 9th …, 2006 | 68 | 2006 |
A community-developed open-source computational ecosystem for big neuro data JT Vogelstein, E Perlman, B Falk, A Baden, W Gray Roncal, ... Nature methods 15 (11), 846-847, 2018 | 67 | 2018 |
Systems, devices, and methods for image processing to generate an image having predictive tagging G Johnson, C Ounkomol, F Collman, S Seshamani US Patent 10,935,773, 2021 | 42 | 2021 |
Cell-type-specific inhibitory circuitry from a connectomic census of mouse visual cortex CM Schneider-Mizell, AL Bodor, D Brittain, JA Buchanan, DJ Bumbarger, ... bioRxiv, 2023.01. 23.525290, 2024 | 38 | 2024 |
A method for handling intensity inhomogenieties in fMRI sequences of moving anatomy of the early developing brain S Seshamani, X Cheng, M Fogtmann, ME Thomason, C Studholme Medical image analysis 18 (2), 285-300, 2014 | 38 | 2014 |
3D in utero quantification of T2* relaxation times in human fetal brain tissues for age optimized structural and functional MRI AI Blazejewska, S Seshamani, SK McKown, JS Caucutt, M Dighe, ... Magnetic resonance in medicine 78 (3), 909-916, 2017 | 37 | 2017 |
Detecting default mode networks in utero by integrated 4D fMRI reconstruction and analysis S Seshamani, AI Blazejewska, S Mckown, J Caucutt, M Dighe, C Gatenby, ... Human brain mapping 37 (11), 4158-4178, 2016 | 34 | 2016 |
Oligodendrocyte precursor cells prune axons in the mouse neocortex JA Buchanan, L Elabbady, F Collman, NL Jorstad, TE Bakken, C Ott, ... BioRxiv, 2021.05. 29.446047, 2021 | 28 | 2021 |
A scalable and modular automated pipeline for stitching of large electron microscopy datasets G Mahalingam, R Torres, D Kapner, ET Trautman, T Fliss, S Seshamani, ... Elife 11, e76534, 2022 | 21 | 2022 |
Expansion-assisted selective plane illumination microscopy for nanoscale imaging of centimeter-scale tissues A Glaser, J Chandrashekar, S Vasquez, C Arshadi, N Ouellette, X Jiang, ... bioRxiv, 2023.06. 08.544277, 2023 | 18 | 2023 |
Cascaded slice to volume registration for moving fetal FMRI S Seshamani, M Fogtmann, X Cheng, M Thomason, C Gatenby, ... 2013 IEEE 10th International Symposium on Biomedical Imaging, 796-799, 2013 | 18 | 2013 |
A meta method for image matching S Seshamani, R Kumar, G Mullin, T Dassopoulos, GD Hager IEEE transactions on medical imaging 30 (8), 1468-1479, 2011 | 17 | 2011 |
Learning disease severity for capsule endoscopy images R Kumar, P Rajan, S Bejakovic, S Seshamani, G Mullin, T Dassopoulos, ... 2009 IEEE International Symposium on Biomedical Imaging: From Nano to Macro …, 2009 | 15 | 2009 |
Direct global adjustment methods for endoscopic mosaicking S Seshamani, MD Smith, JJ Corso, MO Filipovich, A Natarajan, GD Hager Medical Imaging 2009: Visualization, Image-Guided Procedures, and Modeling …, 2009 | 15 | 2009 |
Quantitative census of local somatic features in mouse visual cortex L Elabbady, S Seshamani, S Mu, G Mahalingam, C Schneider-Mizell, ... bioRxiv, 2022.07. 20.499976, 2022 | 14 | 2022 |