PGAP: pan-genomes analysis pipeline Y Zhao, J Wu, J Yang, S Sun, J Xiao, J Yu Bioinformatics 28 (3), 416-418, 2012 | 520 | 2012 |
PanGP: a tool for quickly analyzing bacterial pan-genome profile Y Zhao, X Jia, J Yang, Y Ling, Z Zhang, J Yu, J Wu, J Xiao Bioinformatics 30 (9), 1297-1299, 2014 | 192 | 2014 |
The complete chloroplast genome provides insight into the evolution and polymorphism of Panax ginseng Y Zhao, J Yin, H Guo, Y Zhang, W Xiao, C Sun, J Wu, X Qu, J Yu, X Wang, ... Frontiers in plant science 5, 696, 2015 | 121 | 2015 |
Genomic reconnaissance of clinical isolates of emerging human pathogen Mycobacterium abscessus reveals high evolutionary potential SW Choo, WY Wee, YF Ngeow, W Mitchell, JL Tan, GJ Wong, Y Zhao, ... Scientific reports 4 (1), 4061, 2014 | 75 | 2014 |
Interplay of estrogen receptors and FOXA factors in the liver cancer Y Zhao, Z Li Molecular and cellular endocrinology 418, 334-339, 2015 | 66 | 2015 |
MethBank 3.0: a database of DNA methylomes across a variety of species R Li, F Liang, M Li, D Zou, S Sun, Y Zhao, W Zhao, Y Bao, J Xiao, Z Zhang Nucleic acids research 46 (D1), D288-D295, 2018 | 55 | 2018 |
FOXA1 defines cancer cell specificity G Zhang, Y Zhao, Y Liu, LP Kao, X Wang, B Skerry, Z Li Science advances 2 (3), e1501473, 2016 | 51 | 2016 |
PGAweb: a web server for bacterial pan-genome analysis X Chen, Y Zhang, Z Zhang, Y Zhao, C Sun, M Yang, J Wang, Q Liu, ... Frontiers in microbiology 9, 1910, 2018 | 47 | 2018 |
PGAP-X: extension on pan-genome analysis pipeline Y Zhao, C Sun, D Zhao, Y Zhang, Y You, X Jia, J Yang, L Wang, J Wang, ... BMC genomics 19, 115-124, 2018 | 39 | 2018 |
NucMap: a database of genome-wide nucleosome positioning map across species Y Zhao, J Wang, F Liang, Y Liu, Q Wang, H Zhang, M Jiang, Z Zhang, ... Nucleic acids research 47 (D1), D163-D169, 2019 | 38 | 2019 |
Pan-genomic analysis provides insights into the genomic variation and evolution of Salmonella Paratyphi A W Liang, Y Zhao, C Chen, X Cui, J Yu, J Xiao, B Kan PLoS One 7 (9), e45346, 2012 | 34 | 2012 |
PADS Arsenal: a database of prokaryotic defense systems related genes Y Zhang, Z Zhang, H Zhang, Y Zhao, Z Zhang, J Xiao Nucleic acids research 48 (D1), D590-D598, 2020 | 31 | 2020 |
Database resources of the national genomics data center, China national center for bioinformation in 2024 Nucleic Acids Research 52 (D1), D18-D32, 2024 | 29 | 2024 |
“Stripe” transcription factors provide accessibility to co-binding partners in mammalian genomes Y Zhao, SV Vartak, A Conte, X Wang, DA Garcia, E Stevens, SK Jung, ... Molecular cell 82 (18), 3398-3411. e11, 2022 | 28 | 2022 |
Foxa1 is essential for mammary duct formation Y Liu, Y Zhao, B Skerry, X Wang, C Colin‐Cassin, DC Radisky, ... Genesis 54 (5), 277-285, 2016 | 25 | 2016 |
VCGDB: a dynamic genome database of the Chinese population Y Ling, Z Jin, M Su, J Zhong, Y Zhao, J Yu, J Wu, J Xiao BMC genomics 15, 1-13, 2014 | 18 | 2014 |
Assessment and optimization of explainable machine learning models applied to transcriptomic data Y Zhao, J Shao, YW Asmann Genomics, Proteomics and Bioinformatics 20 (5), 899-911, 2022 | 12 | 2022 |
Systematic study on G‐protein couple receptor prototypes: did they really evolve from prokaryotic genes? Z Zhang, Z Jin, Y Zhao, Z Zhang, R Li, J Xiao, J Wu IET systems biology 8 (4), 154-161, 2014 | 7 | 2014 |
Complete genome sequence and comparative genome analysis of a new special Yersinia enterocolitica G Shi, M Su, J Liang, R Duan, W Gu, Y Xiao, Z Zhang, H Qiu, Z Zhang, ... Archives of microbiology 198, 673-687, 2016 | 6 | 2016 |
TFSyntax: a database of transcription factors binding syntax in mammalian genomes Y Zhao Nucleic Acids Research 51 (D1), D306-D314, 2023 | 4 | 2023 |