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Laurence Calzone
Laurence Calzone
Verified email at curie.fr
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Year
The systems biology graphical notation
NL Novère, M Hucka, H Mi, S Moodie, F Schreiber, A Sorokin, E Demir, ...
Nature biotechnology 27 (8), 735-741, 2009
10482009
Integrative analysis of cell cycle control in budding yeast
KC Chen, L Calzone, A Csikasz-Nagy, FR Cross, B Novak, JJ Tyson
Molecular biology of the cell 15 (8), 3841-3862, 2004
7812004
BIOCHAM: an environment for modeling biological systems and formalizing experimental knowledge
L Calzone, F Fages, S Soliman
Bioinformatics 22 (14), 1805-1807, 2006
3232006
Mathematical modelling of cell-fate decision in response to death receptor engagement
L Calzone, L Tournier, S Fourquet, D Thieffry, B Zhivotovsky, E Barillot, ...
PLoS computational biology 6 (3), e1000702, 2010
2322010
Integrative modelling of the influence of MAPK network on cancer cell fate decision
L Grieco, L Calzone, I Bernard-Pierrot, F Radvanyi, B Kahn-Perles, ...
PLoS computational biology 9 (10), e1003286, 2013
1982013
Integrative modelling of the influence of MAPK network on cancer cell fate decision
L Grieco, L Calzone, I Bernard-Pierrot, F Radvanyi, B Kahn-Perles, ...
PLoS computational biology 9 (10), e1003286, 2013
1982013
Computational systems biology of cancer
E Barillot, L Calzone, P Hupe, JP Vert, A Zinovyev
CRC Press, 2013
1632013
A comprehensive modular map of molecular interactions in RB/E2F pathway
L Calzone, A Gelay, A Zinovyev, F Radvanyi, E Barillot
Molecular systems biology 4 (1), 0174, 2008
1592008
Atlas of Cancer Signalling Network: a systems biology resource for integrative analysis of cancer data with Google Maps
I Kuperstein, E Bonnet, HA Nguyen, D Cohen, E Viara, L Grieco, ...
Oncogenesis 4 (7), e160-e160, 2015
1492015
Machine learning biochemical networks from temporal logic properties
L Calzone, N Chabrier-Rivier, F Fages, S Soliman
Transactions on computational systems biology VI, 68-94, 2006
1472006
Mathematical modelling of molecular pathways enabling tumour cell invasion and migration
DPA Cohen, L Martignetti, S Robine, E Barillot, A Zinovyev, L Calzone
PLoS computational biology 11 (11), e1004571, 2015
1372015
Aberrant ERBB4-SRC signaling as a hallmark of group 4 medulloblastoma revealed by integrative phosphoproteomic profiling
A Forget, L Martignetti, S Puget, L Calzone, S Brabetz, D Picard, ...
Cancer cell 34 (3), 379-395. e7, 2018
1332018
Continuous time Boolean modeling for biological signaling: application of Gillespie algorithm
G Stoll, E Viara, E Barillot, L Calzone
BMC systems biology 6, 1-18, 2012
1232012
BiNoM: a Cytoscape plugin for manipulating and analyzing biological networks
A Zinovyev, E Viara, L Calzone, E Barillot
Bioinformatics 24 (6), 876-877, 2008
1232008
MaBoSS 2.0: an environment for stochastic Boolean modeling
G Stoll, B Caron, E Viara, A Dugourd, A Zinovyev, A Naldi, G Kroemer, ...
Bioinformatics 33 (14), 2226-2228, 2017
1152017
Integrative multi-omics module network inference with Lemon-Tree
E Bonnet, L Calzone, T Michoel
PLoS computational biology 11 (2), e1003983, 2015
1132015
A modeling approach to explain mutually exclusive and co-occurring genetic alterations in bladder tumorigenesis
E Remy, S Rebouissou, C Chaouiya, A Zinovyev, F Radvanyi, L Calzone
Cancer research 75 (19), 4042-4052, 2015
1112015
PhysiBoSS: a multi-scale agent-based modelling framework integrating physical dimension and cell signalling
G Letort, A Montagud, G Stoll, R Heiland, E Barillot, P Macklin, A Zinovyev, ...
Bioinformatics 35 (7), 1188-1196, 2019
1052019
The CoLoMoTo interactive notebook: accessible and reproducible computational analyses for qualitative biological networks
A Naldi, C Hernandez, N Levy, G Stoll, PT Monteiro, C Chaouiya, ...
Frontiers in physiology 9, 680, 2018
912018
COVID19 Disease Map, a computational knowledge repository of virus–host interaction mechanisms
M Ostaszewski, A Niarakis, A Mazein, I Kuperstein, R Phair, ...
Molecular systems biology 17 (10), e10387, 2021
792021
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