| An expanded evaluation of protein function prediction methods shows an improvement in accuracy Y Jiang, TR Oron, WT Clark, AR Bankapur, D D'Andrea, R Lepore, ... Genome Biology 17 (184), 2016 | 412 | 2016 |
| Benchmarking joint multi-omics dimensionality reduction approaches for the study of cancer L Cantini, P Zakeri, C Hernandez, A Naldi, D Thieffry, E Remy, A Baudot Nature communications 12 (1), 1-12, 2021 | 143 | 2021 |
| Benchmarking joint multi-omics dimensionality reduction approaches for the study of cancer L Cantini, P Zakeri, C Hernandez, A Naldi, D Thieffry, E Remy, A Baudot Nature communications 12 (1), 1-12, 2021 | 143 | 2021 |
| Linking drug target and pathway activation for effective therapy using multi-task learning M Yang, J Simm, CC Lam, P Zakeri, GJP van Westen, Y Moreau, ... Scientific reports 8 (1), 8322, 2018 | 59 | 2018 |
| Prediction of protein submitochondria locations based on data fusion of various features of sequences P Zakeri, B Moshiri, M Sadeghi Journal of Theoretical Biology 269 (1), 208-216, 2011 | 57 | 2011 |
| Macau: Scalable Bayesian factorization with high-dimensional side information using MCMC J Simm, A Arany, P Zakeri, T Haber, JK Wegner, V Chupakhin, ... 2017 IEEE 27th International Workshop on Machine Learning for Signal …, 2017 | 42 | 2017 |
| Gene prioritization using Bayesian matrix factorization with genomic and phenotypic side information P Zakeri, J Simm, A Arany, S ElShal, Y Moreau Bioinformatics 34 (13), i447-i456, 2018 | 41 | 2018 |
| Macau: scalable bayesian multi-relational factorization with side information using MCMC J Simm, A Arany, P Zakeri, T Haber, JK Wegner, V Chupakhin, ... arXiv preprint arXiv:1509.04610, 2015 | 38 | 2015 |
| Protein fold recognition using geometric kernel data fusion P Zakeri, B Jeuris, R Vandebril, Y Moreau Bioinformatics 30 (13), 1850-1857, 2014 | 30 | 2014 |
| Competitive exclusion during co-infection as a strategy to prevent the spread of a virus: A computational perspective S Vafadar, M Shahdoust, A Kalirad, P Zakeri, M Sadeghi PloS one 16 (2), e0247200, 2021 | 17 | 2021 |
| Gene prioritization through geometric-inspired kernel data fusion P Zakeri, S Elshal, Y Moreau 2015 IEEE International Conference on Bioinformatics and Biomedicine (BIBM …, 2015 | 13 | 2015 |
| Highly scalable tensor factorization for prediction of drug-protein interaction type A Arany, J Simm, P Zakeri, T Haber, JK Wegner, V Chupakhin, ... arXiv preprint arXiv:1512.00315, 2015 | 6 | 2015 |
| Clinical population genetic analysis of variants in the SARS-CoV-2 receptor ACE2 A Ardeshirdavani, P Zakeri, A Mehrtash, SM Hosseini, G Li, ... medRxiv, 2020.05. 27.20115071, 2020 | 5 | 2020 |
| Angiogenesis goes computational–The future way forward to discover new angiogenic targets? A Subramanian, P Zakeri, M Mousa, H Alnaqbi, FY Alshamsi, L Bettoni, ... Computational and Structural Biotechnology Journal 20, 5235-5255, 2022 | 4 | 2022 |
| A comprehensive comparison of two MEDLINE annotators for disease and gene linkage: sometimes less is more S ElShal, J Simm, A Arany, P Zakeri, J Davis, Y Moreau Bioinformatics and Biomedical Engineering: 4th International Conference …, 2016 | 3 | 2016 |
| Author Correction: Linking drug target and pathway activation for effective therapy using multi-task learning M Yang, J Simm, CC Lam, P Zakeri, GJP van Westen, Y Moreau, ... Scientific Reports 9, 2019 | 1 | 2019 |
| Benchmarking joint multi-omics dimensionality reduction approaches for cancer study L Cantini, P Zakeri, C Hernandez, A Naldi, D Thieffry, E Remy, A Baudot | | 2020 |
| Clinical population genetic analysis of variants in the SARS-CoV-2 receptor ACE2 (preprint) A Ardeshirdavani, P Zakeri, A Mehrtash, SM Hosseini, G Li, ... | | 2020 |
| Linking drug target and pathway activation for effective therapy using multi-task learning (vol 8, 8322, 2018) M Yang, J Simm, CC Lam, P Zakeri, GJP van Westen, Y Moreau, ... Scientific Reports 9 (1), 2019 | | 2019 |
| Machine Learning for Genomic Data Fusion P Zakeri | | 2018 |
Yves MoreauUniversity of LeuvenVerified email at esat.kuleuven.be
