Annie Chateau
Annie Chateau
Maître de conférences, Université de Montpellier
Verifisert e-postadresse på lirmm.fr
Sitert av
Sitert av
An improved genome of the model marine alga Ostreococcus tauri unfolds by assessing Illumina de novo assemblies
R Blanc-Mathieu, B Verhelst, E Derelle, S Rombauts, FY Bouget, I Carré, ...
BMC genomics 15 (1), 1-12, 2014
Reconstructing ancestral gene orders using conserved intervals
A Bergeron, M Blanchette, A Chateau, C Chauve
International Workshop on Algorithms in Bioinformatics, 14-25, 2004
Exact approaches for scaffolding
M Weller, A Chateau, R Giroudeau
BMC bioinformatics 16 (14), 1-18, 2015
A complexity and approximation framework for the maximization scaffolding problem
A Chateau, R Giroudeau
Theoretical Computer Science 595, 92-106, 2015
Ancestral gene synteny reconstruction improves extant species scaffolding
Y Anselmetti, V Berry, C Chauve, A Chateau, E Tannier, S Bérard
BMC genomics 16 (10), 1-13, 2015
A CSP approach for metamodel instantiation
A Ferdjoukh, AE Baert, A Chateau, R Coletta, C Nebut
2013 IEEE 25th International Conference on Tools with Artificial …, 2013
Instantiation of Meta-models Constrained with OCL: a CSP Approach
A Ferdjoukh, A Baert, E Bourreau, A Chateau, R Coletta, C Nebut
2015 3rd International Conference on Model-Driven Engineering and Software …, 2015
Computation of perfect DCJ rearrangement scenarios with linear and circular chromosomes
S Bérard, A Chateau, C Chauve, C Paul, E Tannier
Journal of Computational Biology 16 (10), 1287-1309, 2009
Inferring positional homologs with common intervals of sequences
G Blin, A Chateau, C Chauve, Y Gingras
RECOMB Workshop on Comparative Genomics, 24-38, 2006
Aligning the unalignable: bacteriophage whole genome alignments
S Bérard, A Chateau, N Pompidor, P Guertin, A Bergeron, KM Swenson
BMC bioinformatics 17 (1), 1-13, 2016
Complexity and Polynomial-Time Approximation Algorithms around the Scaffolding Problem
A Chateau, R Giroudeau
These proceedings contain the papers that were presented at the First …, 2014
Machine learning meets genome assembly
K Padovani de Souza, JC Setubal, AC Ponce de Leon F. de Carvalho, ...
Briefings in Bioinformatics 20 (6), 2116-2129, 2019
Measuring differences to compare sets of models and improve diversity in MDE
A Ferdjoukh, F Galinier, E Bourreau, A Chateau, C Nebut
ICSEA: International Conference on Software Engineering Advances, 2017
On the complexity of scaffolding problems: from cliques to sparse graphs
M Weller, A Chateau, R Giroudeau
Combinatorial Optimization and Applications, 409-423, 2015
Scaffolding problems revisited: Complexity, approximation and fixed parameter tractable algorithms, and some special cases
M Weller, A Chateau, C Dallard, R Giroudeau
Algorithmica 80 (6), 1771-1803, 2018
On the linearization of scaffolds sharing repeated contigs
M Weller, A Chateau, R Giroudeau
International Conference on Combinatorial Optimization and Applications, 509-517, 2017
A model-driven approach to generate relevant and realistic datasets
A Ferdjoukh, E Bourreau, A Chateau, C Nebut
SEKE: Software Engineering and Knowledge Engineering, 105-109, 2016
Perfect DCJ rearrangement
S Bérard, A Chateau, C Chauve, C Paul, E Tannier
RECOMB International Workshop on Comparative Genomics, 158-169, 2008
Measurement and generation of diversity and meaningfulness in model driven engineering
A Ferdjoukh, F Galinier, E Bourreau, A Chateau, C Nebut
International Journal On Advances in Software 11 (1/2), 131-146, 2018
Exploring Genome Rearrangements using Virtual Hybridization
M Belcaid, A Bergeron, A Chateau, C Chauve, Y Gingras, G Poisson, ...
APBC 2007, 205-214, 2007
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