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Benjamin Bolduc
Benjamin Bolduc
Verified email at osu.edu
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Year
Marine DNA viral macro-and microdiversity from pole to pole
AC Gregory, AA Zayed, N Conceição-Neto, B Temperton, B Bolduc, ...
Cell 177 (5), 1109-1123. e14, 2019
6022019
Taxonomic assignment of uncultivated prokaryotic virus genomes is enabled by gene-sharing networks
H Bin Jang, B Bolduc, O Zablocki, JH Kuhn, S Roux, EM Adriaenssens, ...
Nature biotechnology 37 (6), 632-639, 2019
5942019
VirSorter2: a multi-classifier, expert-guided approach to detect diverse DNA and RNA viruses
J Guo, B Bolduc, AA Zayed, A Varsani, G Dominguez-Huerta, TO Delmont, ...
Microbiome 9, 1-13, 2021
5232021
Healthy human gut phageome
P Manrique, B Bolduc, ST Walk, J van der Oost, WM de Vos, MJ Young
Proceedings of the National Academy of Sciences 113 (37), 10400-10405, 2016
5152016
DRAM for distilling microbial metabolism to automate the curation of microbiome function
M Shaffer, MA Borton, BB McGivern, AA Zayed, SL La Rosa, LM Solden, ...
Nucleic acids research 48 (16), 8883-8900, 2020
4362020
The gut virome database reveals age-dependent patterns of virome diversity in the human gut
AC Gregory, O Zablocki, AA Zayed, A Howell, B Bolduc, MB Sullivan
Cell host & microbe 28 (5), 724-740. e8, 2020
427*2020
Host-linked soil viral ecology along a permafrost thaw gradient
JB Emerson, S Roux, JR Brum, B Bolduc, BJ Woodcroft, HB Jang, ...
Nature microbiology 3 (8), 870-880, 2018
3882018
vConTACT: an iVirus tool to classify double-stranded DNA viruses that infect Archaea and Bacteria
B Bolduc, HB Jang, G Doulcier, ZQ You, S Roux, MB Sullivan
PeerJ 5, e3243, 2017
2402017
Soil viruses are underexplored players in ecosystem carbon processing
G Trubl, HB Jang, S Roux, JB Emerson, N Solonenko, DR Vik, L Solden, ...
MSystems 3 (5), 10.1128/msystems. 00076-18, 2018
2032018
Single-virus genomics reveals hidden cosmopolitan and abundant viruses
F Martinez-Hernandez, O Fornas, M Lluesma Gomez, B Bolduc, ...
Nature communications 8 (1), 15892, 2017
1742017
Discovery of several thousand highly diverse circular DNA viruses
MJ Tisza, DV Pastrana, NL Welch, B Stewart, A Peretti, GJ Starrett, ...
Elife 9, e51971, 2020
1602020
Cryptic and abundant marine viruses at the evolutionary origins of Earth’s RNA virome
AA Zayed, JM Wainaina, G Dominguez-Huerta, E Pelletier, J Guo, ...
Science 376 (6589), 156-162, 2022
1412022
Identification of novel positive-strand RNA viruses by metagenomic analysis of archaea-dominated Yellowstone hot springs
B Bolduc, DP Shaughnessy, YI Wolf, EV Koonin, FF Roberto, M Young
Journal of virology 86 (10), 5562-5573, 2012
1342012
iVirus: facilitating new insights in viral ecology with software and community data sets imbedded in a cyberinfrastructure
B Bolduc, K Youens-Clark, S Roux, BL Hurwitz, MB Sullivan
The ISME journal 11 (1), 7-14, 2017
1292017
Comparative metagenomics of eight geographically remote terrestrial hot springs
P Menzel, SR Gudbergsdóttir, AG Rike, L Lin, Q Zhang, P Contursi, ...
Microbial ecology 70, 411-424, 2015
1172015
Cenote-Taker 2 democratizes virus discovery and sequence annotation
MJ Tisza, AK Belford, G Dominguez-Huerta, B Bolduc, CB Buck
Virus evolution 7 (1), veaa100, 2021
1002021
A target-unrelated peptide in an M13 phage display library traced to an advantageous mutation in the gene II ribosome-binding site
LA Brammer, B Bolduc, JL Kass, KM Felice, CJ Noren, MF Hall
Analytical biochemistry 373 (1), 88-98, 2008
942008
Potential virus-mediated nitrogen cycling in oxygen-depleted oceanic waters
MC Gazitúa, DR Vik, S Roux, AC Gregory, B Bolduc, B Widner, ...
The ISME Journal 15 (4), 981-998, 2021
752021
VirSorter2: a multi-classifier, expert-guided approach to detect diverse DNA and RNA viruses. Microbiome 9: 37
J Guo, B Bolduc, AA Zayed, A Varsani, G Dominguez-Huerta, TO Delmont, ...
682021
Archaeal viruses: diversity, replication, and structure
N Dellas, JC Snyder, B Bolduc, MJ Young
Annual Review of Virology 1, 399-426, 2014
642014
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Articles 1–20