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Joshua Z. Levin
Joshua Z. Levin
Broad Institute of MIT & Harvard
Verifisert e-postadresse på broadinstitute.org - Startside
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Full-length transcriptome assembly from RNA-Seq data without a reference genome
MG Grabherr, BJ Haas, M Yassour, JZ Levin, DA Thompson, I Amit, ...
Nature biotechnology 29 (7), 644-652, 2011
18463*2011
Ab initio reconstruction of cell type-specific transcriptomes in mouse reveals the conserved multi-exonic structure of lincRNAs
M Guttman, M Garber, JZ Levin, J Donaghey, J Robinson, X Adiconis, ...
Nature biotechnology 28 (5), 503-510, 2010
14862010
Single-cell transcriptomics reveals bimodality in expression and splicing in immune cells
AK Shalek, R Satija, X Adiconis, RS Gertner, JT Gaublomme, ...
Nature 498 (7453), 236-240, 2013
13212013
Comprehensive Classification of Retinal Bipolar Neurons by Single-Cell Transcriptomics
K Shekhar, SW Lapan, IE Whitney, NM Tran, EZ Macosko, M Kowalczyk, ...
Cell 166 (5), 1308-1323. e30, 2016
10632016
Comprehensive comparative analysis of strand-specific RNA sequencing methods
JZ Levin, M Yassour, X Adiconis, C Nusbaum, DA Thompson, N Friedman, ...
Nature methods 7 (9), 709-715, 2010
8962010
RNA-SeQC: RNA-seq metrics for quality control and process optimization
DS DeLuca, JZ Levin, A Sivachenko, T Fennell, MD Nazaire, C Williams, ...
Bioinformatics 28 (11), 1530-1532, 2012
8772012
Systematic identification of long noncoding RNAs expressed during zebrafish embryogenesis
A Pauli, E Valen, MF Lin, M Garber, NL Vastenhouw, JZ Levin, L Fan, ...
Genome Research 22 (3), 577-591, 2012
8232012
The African coelacanth genome provides insights into tetrapod evolution
CT Amemiya, J Alföldi, AP Lee, S Fan, H Philippe, I MacCallum, I Braasch, ...
Nature 496 (7445), 311-316, 2013
7352013
Individual brain organoids reproducibly form cell diversity of the human cerebral cortex
S Velasco, AJ Kedaigle, SK Simmons, A Nash, M Rocha, G Quadrato, ...
Nature 570 (7762), 523-527, 2019
7052019
Peptidomic discovery of short open reading frame–encoded peptides in human cells
SA Slavoff, AJ Mitchell, AG Schwaid, MN Cabili, J Ma, JZ Levin, ...
Nature chemical biology 9 (1), 59-64, 2013
6312013
Metabolic labeling of RNA uncovers principles of RNA production and degradation dynamics in mammalian cells
M Rabani, JZ Levin, L Fan, X Adiconis, R Raychowdhury, M Garber, ...
Nature biotechnology 29 (5), 436-442, 2011
6242011
Systematic comparison of single-cell and single-nucleus RNA-sequencing methods
J Ding, X Adiconis, SK Simmons, MS Kowalczyk, CC Hession, ...
Nature biotechnology 38 (6), 737-746, 2020
5822020
The SHOOT MERISTEMLESS gene is required for maintenance of undifferentiated cells in Arabidopsis shoot and floral meristems and acts at a different regulatory level than the …
K Endrizzi, B Moussian, A Haecker, JZ Levin, T Laux
The Plant Journal 10 (6), 967-979, 1996
5651996
Comparative functional genomics of the fission yeasts
N Rhind, Z Chen, M Yassour, DA Thompson, BJ Haas, N Habib, ...
Science 332 (6032), 930-936, 2011
5262011
The CLAVATA and SHOOT MERISTEMLESS loci competitively regulate meristem activity in Arabidopsis
SE Clark, SE Jacobsen, JZ Levin, EM Meyerowitz
Development 122 (5), 1567-1575, 1996
5221996
Comparative analysis of RNA sequencing methods for degraded or low-input samples
X Adiconis, D Borges-Rivera, R Satija, DS DeLuca, MA Busby, AM Berlin, ...
Nature methods 10 (7), 623-629, 2013
5062013
Single-cell transcriptomic profiling of the aging mouse brain
M Ximerakis, SL Lipnick, BT Innes, SK Simmons, X Adiconis, D Dionne, ...
Nature neuroscience 22 (10), 1696-1708, 2019
4542019
Single-Cell Profiles of Retinal Ganglion Cells Differing in Resilience to Injury Reveal Neuroprotective Genes
NM Tran, K Shekhar, IE Whitney, A Jacobi, I Benhar, G Hong, W Yan, ...
Neuron 104 (6), 1039-1055. e12, 2019
4112019
Whole genome deep sequencing of HIV-1 reveals the impact of early minor variants upon immune recognition during acute infection
MR Henn, CL Boutwell, P Charlebois, NJ Lennon, KA Power, ...
PLoS pathogens 8 (3), e1002529, 2012
3942012
Insertional mutagenesis of genes required for seed development in Arabidopsis thaliana
J McElver, I Tzafrir, G Aux, R Rogers, C Ashby, K Smith, C Thomas, ...
Genetics 159 (4), 1751-1763, 2001
3882001
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Artikler 1–20