| A compact vocabulary of paratope-epitope interactions enables predictability of antibody-antigen binding R Akbar, PA Robert, M Pavlović, JR Jeliazkov, I Snapkov, A Slabodkin, ... Cell Reports 34 (11), 2021 | 148 | 2021 |
| In silico proof of principle of machine learning-based antibody design at unconstrained scale R Akbar, PA Robert, CR Weber, M Widrich, R Frank, M Pavlović, ... MAbs 14 (1), 2031482, 2022 | 84 | 2022 |
| Augmenting adaptive immunity: progress and challenges in the quantitative engineering and analysis of adaptive immune receptor repertoires AJ Brown, I Snapkov, R Akbar, M Pavlović, E Miho, GK Sandve, V Greiff Molecular Systems Design & Engineering 4 (4), 701-736, 2019 | 65 | 2019 |
| immuneSIM: tunable multi-feature simulation of B-and T-cell receptor repertoires for immunoinformatics benchmarking CR Weber, R Akbar, A Yermanos, M Pavlović, I Snapkov, GK Sandve, ... Bioinformatics 36 (11), 3594-3596, 2020 | 63 | 2020 |
| The immuneML ecosystem for machine learning analysis of adaptive immune receptor repertoires M Pavlović, L Scheffer, K Motwani, C Kanduri, R Kompova, N Vazov, ... Nature Machine Intelligence 3 (11), 936-944, 2021 | 59 | 2021 |
| The role of formyl peptide receptor 1 (FPR1) in neuroblastoma tumorigenesis I Snapkov, CO Öqvist, Y Figenschau, P Kogner, JI Johnsen, ... BMC cancer 16, 1-12, 2016 | 53 | 2016 |
| Inhibition of chemerin/CMKLR1 axis in neuroblastoma cells reduces clonogenicity and cell viability in vitro and impairs tumor growth in vivo C Tümmler, I Snapkov, M Wickström, U Moens, L Ljungblad, LHM Elfman, ... Oncotarget 8 (56), 95135, 2017 | 44 | 2017 |
| Progress and challenges in mass spectrometry-based analysis of antibody repertoires I Snapkov, M Chernigovskaya, P Sinitcyn, K Lê Quý, TA Nyman, V Greiff Trends in Biotechnology 40 (4), 463-481, 2022 | 31 | 2022 |
| The future of blood testing is the immunome RA Arnaout, ETL Prak, N Schwab, F Rubelt, ... Frontiers in Immunology 12, 626793, 2021 | 31 | 2021 |
| Unconstrained generation of synthetic antibody–antigen structures to guide machine learning methodology for antibody specificity prediction PA Robert, R Akbar, R Frank, M Pavlović, M Widrich, I Snapkov, ... Nature Computational Science 2 (12), 845-865, 2022 | 30 | 2022 |
| Individualized VDJ recombination predisposes the available Ig sequence space A Slabodkin, M Chernigovskaya, I Mikocziova, R Akbar, L Scheffer, ... Genome Research 31 (12), 2209-2224, 2021 | 30 | 2021 |
| Agnoprotein of polyomavirus BK interacts with proliferating cell nuclear antigen and inhibits DNA replication N Gerits, M Johannessen, C Tümmler, M Walquist, S Kostenko, I Snapkov, ... Virology journal 12, 1-14, 2015 | 28 | 2015 |
| One billion synthetic 3D-antibody-antigen complexes enable unconstrained machine-learning formalized investigation of antibody specificity prediction PA Robert, R Akbar, R Frank, M Pavlović, M Widrich, I Snapkov, ... BioRXiV, 2021.07. 06.451258, 2021 | 24 | 2021 |
| Each pregnancy linearly changes immune gene expression in the blood of healthy women compared with breast cancer patients E Lund, A Nakamura, I Snapkov, JC Thalabard, KS Olsen, L Holden, ... Clinical epidemiology, 931-940, 2018 | 15 | 2018 |
| Reference-based comparison of adaptive immune receptor repertoires CR Weber, T Rubio, L Wang, W Zhang, PA Robert, R Akbar, I Snapkov, ... Cell Reports Methods, 2022 | 12 | 2022 |
| Dynamic changes in the T cell receptor repertoire during treatment with radiotherapy combined with an immune checkpoint inhibitor ÅK Öjlert, D Nebdal, I Snapkov, V Olsen, J Kidman, V Greiff, J Chee, ... Molecular Oncology 15 (11), 2958-2968, 2021 | 7 | 2021 |
| The blood transcriptome prior to ovarian cancer diagnosis: A case-control study in the NOWAC postgenome cohort M Jareid, I Snapkov, M Holden, LTR Busund, E Lund, TH Nøst Plos one 16 (8), e0256442, 2021 | 4 | 2021 |
| FITC conjugation markedly enhances hepatic clearance of N-formyl peptides CI Øie, I Snapkov, K Elvevold, B Sveinbjørnsson, B Smedsrød Plos one 11 (8), e0160602, 2016 | 4 | 2016 |
| A finite vocabulary of antibody-antigen interaction enables predictability of paratope-epitope binding R Akbar, JR Jeliazkov, PA Robert, I Snapkov, M Pavlović, A Slabodkin, ... bioRxiv, 759498, 2019 | 3 | 2019 |
| Benchmarking and integrating human B-cell receptor genomic and antibody proteomic profiling K Le Quy, M Chernigovskaya, M Stensland, S Singh, J Leem, S Revale, ... bioRxiv, 2023.11. 01.565093, 2023 | 1 | 2023 |
