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Céline Hernandez
Céline Hernandez
I2BC / CNRS
Verified email at i2bc.paris-saclay.fr
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Cited by
Year
ExPASy: SIB bioinformatics resource portal
P Artimo, M Jonnalagedda, K Arnold, D Baratin, G Csardi, E De Castro, ...
Nucleic acids research 40 (W1), W597-W603, 2012
19682012
Qualitative simulation of genetic regulatory networks using piecewise-linear models
H De Jong, JL Gouzé, C Hernandez, M Page, T Sari, J Geiselmann
Bulletin of mathematical biology 66 (2), 301-340, 2004
5282004
Genetic Network Analyzer: qualitative simulation of genetic regulatory networks
H de Jong, J Geiselmann, C Hernandez, M Page
Bioinformatics 19 (3), 336-344, 2003
3532003
RSAT 2015: regulatory sequence analysis tools
A Medina-Rivera, M Defrance, O Sand, C Herrmann, ...
Nucleic acids research 43 (W1), W50-W56, 2015
2622015
Qualitative simulation of the initiation of sporulation in Bacillus subtilis
H De Jong, J Geiselmann, G Batt, C Hernandez, M Page
Bulletin of Mathematical Biology 66 (2), 261-299, 2004
1632004
ChIP-exo signal associated with DNA-binding motifs provides insight into the genomic binding of the glucocorticoid receptor and cooperating transcription factors
SR Starick, J Ibn-Salem, M Jurk, C Hernandez, MI Love, HR Chung, ...
Genome research 25 (6), 825-835, 2015
1312015
Hybrid modeling and simulation of genetic regulatory networks: A qualitative approach
H Jong, JL Gouzé, C Hernandez, M Page, T Sari, J Geiselmann
International Workshop on Hybrid Systems: Computation and Control, 267-282, 2003
802003
Qualitative simulation of genetic regulatory networks: Method and application
H De Jong, M Page, C Hernandez, J Geiselmann
International Joint Conference on Artificial intelligence 17 (1), 67-73, 2001
802001
Cooperative development of logical modelling standards and tools with CoLoMoTo
A Naldi, PT Monteiro, C Müssel, HA Kestler, D Thieffry, I Xenarios, ...
Bioinformatics 31 (7), 1154-1159, 2015
772015
Logical modeling and analysis of cellular regulatory networks with ginsim 3.0
A Naldi, C Hernandez, W Abou-Jaoudé, PT Monteiro, C Chaouiya, ...
Frontiers in physiology 9, 646, 2018
682018
Logical Modeling and Analysis of Cellular Regulatory Networks With GINsim 3.0.
A Naldi, C Hernandez, W Abou-Jaoudé, PT Monteiro, C Chaouiya, ...
Frontiers in physiology 9, 646-646, 2018
682018
Benchmarking joint multi-omics dimensionality reduction approaches for the study of cancer
L Cantini, P Zakeri, C Hernandez, A Naldi, D Thieffry, E Remy, A Baudot
Nature communications 12 (1), 1-12, 2021
592021
The CoLoMoTo interactive notebook: accessible and reproducible computational analyses for qualitative biological networks
A Naldi, C Hernandez, N Levy, G Stoll, PT Monteiro, C Chaouiya, ...
Frontiers in physiology 9, 680, 2018
572018
A novel pulse-chase SILAC strategy measures changes in protein decay and synthesis rates induced by perturbation of proteostasis with an Hsp90 inhibitor
I Fierro-Monti, J Racle, C Hernandez, P Waridel, V Hatzimanikatis, ...
PloS one 8 (11), e80423, 2013
512013
Quantitative proteomics identifies the membrane‐associated peroxidase GPx8 as a cellular substrate of the hepatitis C virus NS3‐4A protease
K Morikawa, J Gouttenoire, C Hernandez, VL Dao Thi, HTL Tran, ...
Hepatology 59 (2), 423-433, 2014
472014
Addressing trypsin bias in large scale (phospho) proteome analysis by size exclusion chromatography and secondary digestion of large post-trypsin peptides
BQ Tran, C Hernandez, P Waridel, A Potts, J Barblan, F Lisacek, ...
Journal of proteome research 10 (2), 800-811, 2010
392010
Cooperation between T cell receptor and Toll-like receptor 5 signaling for CD4+ T cell activation
O Rodríguez-Jorge, LA Kempis-Calanis, W Abou-Jaoudé, ...
Science signaling 12 (577), eaar3641, 2019
382019
Aldente and BioGraph: An improved peptide mass fingerprinting protein identification environment
M Tuloup, C Hernandez, I Coro, C Hoogland, PA Binz, RD Appel
Proceedings of the Swiss Proteomics Society 2003 Congress: Understanding …, 2003
382003
Dynamic impacts of the inhibition of the molecular chaperone Hsp90 on the T-cell proteome have implications for anti-cancer therapy
I Fierro-Monti, P Echeverria, J Racle, C Hernandez, D Picard, M Quadroni
PLoS One 8 (11), e80425, 2013
372013
Histone Chaperone SSRP1 is Essential for Wnt Signaling Pathway Activity During Osteoblast Differentiation
T Hossan, S Nagarajan, SJ Baumgart, W Xie, RT Magallanes, ...
STEM CELLS 34 (5), 1369-1376, 2016
352016
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