Cristian Coarfa
Cristian Coarfa
Associate Professor in Molecular and Cellular Biology, Baylor College of Medicine
Verified email at
Cited by
Cited by
Integrative analysis of 111 reference human epigenomes
Roadmap Epigenomics Consortium Integrative analysis coordination Kundaje ...
Nature 518 (7539), 317-330, 2015
A metagenomic approach to characterization of the vaginal microbiome signature in pregnancy
K Aagaard, K Riehle, J Ma, N Segata, TA Mistretta, C Coarfa, S Raza, ...
PloS one 7 (6), e36466, 2012
The somatic genomic landscape of chromophobe renal cell carcinoma
CF Davis, CJ Ricketts, M Wang, L Yang, AD Cherniack, H Shen, C Buhay, ...
Cancer cell 26 (3), 319-330, 2014
Gastrointestinal microbiome signatures of pediatric patients with irritable bowel syndrome
DM Saulnier, K Riehle, TA Mistretta, MA Diaz, D Mandal, S Raza, ...
Gastroenterology 141 (5), 1782-1791, 2011
Comparison of sequencing-based methods to profile DNA methylation and identification of monoallelic epigenetic modifications
RA Harris, T Wang, C Coarfa, RP Nagarajan, C Hong, SL Downey, ...
Nature biotechnology 28 (10), 1097-1105, 2010
Functional annotation of the human brain methylome identifies tissue-specific epigenetic variation across brain and blood
MN Davies, M Volta, R Pidsley, K Lunnon, A Dixit, S Lovestone, C Coarfa, ...
Genome biology 13 (6), 1-14, 2012
Circadian homeostasis of liver metabolism suppresses hepatocarcinogenesis
NM Kettner, H Voicu, MJ Finegold, C Coarfa, A Sreekumar, N Putluri, ...
Cancer cell 30 (6), 909-924, 2016
An integrative variant analysis suite for whole exome next-generation sequencing data
D Challis, J Yu, US Evani, AR Jackson, S Paithankar, C Coarfa, ...
BMC bioinformatics 13 (1), 1-12, 2012
Proinflammatory role for let-7 microRNAS in experimental asthma
S Polikepahad, JM Knight, AO Naghavi, T Oplt, CJ Creighton, C Shaw, ...
Journal of Biological Chemistry 285 (39), 30139-30149, 2010
Fatty acid oxidation-driven Src links mitochondrial energy reprogramming and oncogenic properties in triple-negative breast cancer
JH Park, S Vithayathil, S Kumar, PL Sung, LE Dobrolecki, V Putluri, ...
Cell reports 14 (9), 2154-2165, 2016
Genomic, pathway network, and immunologic features distinguishing squamous carcinomas
JD Campbell, C Yau, R Bowlby, Y Liu, K Brennan, H Fan, AM Taylor, ...
Cell reports 23 (1), 194-212. e6, 2018
Oncogenic lncRNA downregulates cancer cell antigen presentation and intrinsic tumor suppression
Q Hu, Y Ye, LC Chan, Y Li, K Liang, A Lin, SD Egranov, Y Zhang, W Xia, ...
Nature immunology 20 (7), 835-851, 2019
ReadDepth: a parallel R package for detecting copy number alterations from short sequencing reads
CA Miller, O Hampton, C Coarfa, A Milosavljevic
PloS one 6 (1), e16327, 2011
Prostate cancer-associated mutations in speckle-type POZ protein (SPOP) regulate steroid receptor coactivator 3 protein turnover
C Geng, B He, L Xu, CE Barbieri, VK Eedunuri, SA Chew, M Zimmermann, ...
Proceedings of the National Academy of Sciences 110 (17), 6997-7002, 2013
The repertoire and features of human platelet microRNAs
H Ple, P Landry, A Benham, C Coarfa, PH Gunaratne, P Provost
PloS one 7 (12), e50746, 2012
A SNP discovery method to assess variant allele probability from next-generation resequencing data
Y Shen, Z Wan, C Coarfa, R Drabek, L Chen, EA Ostrowski, Y Liu, ...
Genome research 20 (2), 273-280, 2010
Performance analysis of TLS Web servers
C Coarfa, P Druschel, DS Wallach
ACM Transactions on Computer Systems (TOCS) 24 (1), 39-69, 2006
SOX2 regulates YAP1 to maintain stemness and determine cell fate in the osteo-adipo lineage
E Seo, U Basu-Roy, PH Gunaratne, C Coarfa, DS Lim, C Basilico, ...
Cell reports 3 (6), 2075-2087, 2013
An evaluation of global address space languages: co-array fortran and unified parallel c
C Coarfa, Y Dotsenko, J Mellor-Crummey, F Cantonnet, T El-Ghazawi, ...
Proceedings of the tenth ACM SIGPLAN symposium on Principles and practice of …, 2005
An epigenomic approach to therapy for tamoxifen-resistant breast cancer
Q Feng, Z Zhang, MJ Shea, CJ Creighton, C Coarfa, SG Hilsenbeck, ...
Cell research 24 (7), 809-819, 2014
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