Rolf Sommer Kaas
Rolf Sommer Kaas
Research Scientist
Verified email at food.dtu.dk
Title
Cited by
Cited by
Year
Real-time whole-genome sequencing for routine typing, surveillance, and outbreak detection of verotoxigenic Escherichia coli
KG Joensen, F Scheutz, O Lund, H Hasman, RS Kaas, EM Nielsen, ...
Journal of clinical microbiology 52 (5), 1501-1510, 2014
6202014
Identification and assembly of genomes and genetic elements in complex metagenomic samples without using reference genomes
HB Nielsen, M Almeida, AS Juncker, S Rasmussen, J Li, S Sunagawa, ...
Nature biotechnology 32 (8), 822-828, 2014
5912014
Detection of mcr-1 encoding plasmid-mediated colistin-resistant Escherichia coli isolates from human bloodstream infection and imported chicken meat, Denmark 2015
H Hasman, AM Hammerum, F Hansen, RS Hendriksen, B Olesen, ...
Eurosurveillance 20 (49), 30085, 2015
3312015
Solving the problem of comparing whole bacterial genomes across different sequencing platforms
RS Kaas, P Leekitcharoenphon, FM Aarestrup, O Lund
PloS one 9 (8), e104984, 2014
3032014
Population genetics of Vibrio cholerae from Nepal in 2010: evidence on the origin of the Haitian outbreak
RS Hendriksen, LB Price, JM Schupp, JD Gillece, RS Kaas, ...
MBio 2 (4), 2011
2982011
Genotyping using whole-genome sequencing is a realistic alternative to surveillance based on phenotypic antimicrobial susceptibility testing
E Zankari, H Hasman, RS Kaas, AM Seyfarth, Y Agersų, O Lund, ...
Journal of Antimicrobial Chemotherapy 68 (4), 771-777, 2013
2422013
Evaluation of whole genome sequencing for outbreak detection of Salmonella enterica
P Leekitcharoenphon, EM Nielsen, RS Kaas, O Lund, FM Aarestrup
PloS one 9 (2), e87991, 2014
1802014
Estimating variation within the genes and inferring the phylogeny of 186 sequenced diverse Escherichia coli genomes
RS Kaas, C Friis, DW Ussery, FM Aarestrup
BMC genomics 13 (1), 1-13, 2012
1732012
Global monitoring of antimicrobial resistance based on metagenomics analyses of urban sewage
RS Hendriksen, P Munk, P Njage, B Van Bunnik, L McNally, ...
Nature communications 10 (1), 1-12, 2019
1212019
snpTree-a web-server to identify and construct SNP trees from whole genome sequence data
P Leekitcharoenphon, RS Kaas, MCF Thomsen, C Friis, S Rasmussen, ...
BMC genomics 13 (7), 1-8, 2012
862012
Genomic signature of multidrug-resistant Salmonella enterica serovar Typhi isolates related to a massive outbreak in Zambia between 2010 and 2012
RS Hendriksen, P Leekitcharoenphon, O Lukjancenko, ...
Journal of clinical microbiology 53 (1), 262-272, 2015
652015
Veillonella, Firmicutes: Microbes disguised as Gram negatives
T Vesth, A Ozen, SC Andersen, RS Kaas, O Lukjancenko, J Bohlin, ...
Standards in genomic sciences 9 (2), 431-448, 2013
362013
Characterization and Genetic Variation of Vibrio cholerae Isolated from Clinical and Environmental Sources in Thailand
A Siriphap, P Leekitcharoenphon, RS Kaas, C Theethakaew, ...
PLoS One 12 (1), e0169324, 2017
332017
European freshwater VHSV genotype Ia isolates divide into two distinct subpopulations
S Kahns, HF Skall, RS Kaas, H Korsholm, BB Jensen, SP Jonstrup, ...
Diseases of aquatic organisms 99 (1), 23-35, 2012
282012
An assessment of different genomic approaches for inferring phylogeny of Listeria monocytogenes
C Henri, P Leekitcharoenphon, HA Carleton, N Radomski, RS Kaas, ...
Frontiers in Microbiology 8, 2351, 2017
242017
Evaluating next-generation sequencing for direct clinical diagnostics in diarrhoeal disease
KG Joensen, ALŲ Engsbro, O Lukjancenko, RS Kaas, O Lund, H Westh, ...
European Journal of Clinical Microbiology & Infectious Diseases 36 (7), 1325 …, 2017
242017
The Lake Chad Basin, an Isolated and Persistent Reservoir of Vibrio cholerae O1: A Genomic Insight into the Outbreak in Cameroon, 2010
RS Kaas, A Ngandjio, A Nzouankeu, A Siriphap, MC Fonkoua, ...
PLoS One 11 (5), e0155691, 2016
232016
Genome-wide high-throughput screening to investigate essential genes involved in methicillin-resistant Staphylococcus aureus sequence type 398 survival
MT Christiansen, RS Kaas, RR Chaudhuri, MA Holmes, H Hasman, ...
PLoS One 9 (2), e89018, 2014
202014
First detection of linezolid resistance due to the optrA gene in enterococci isolated from food products in Denmark
LM Cavaco, H Korsgaard, RS Kaas, AM Seyfarth, P Leekitcharoenphon, ...
J Glob Antimicrob Resist 9, 128-129, 2017
162017
Fatal septicemia linked to transmission of MRSA clonal complex 398 in hospital and nursing home, Denmark
RT Nielsen, M Kemp, A Holm, MN Skov, M Detlefsen, H Hasman, ...
Emerging infectious diseases 22 (5), 900, 2016
162016
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