| Structure and function of the bacterial root microbiota in wild and domesticated barley D Bulgarelli, R Garrido-Oter, PC Münch, A Weiman, J Dröge, Y Pan, ... Cell host & microbe 17 (3), 392-403, 2015 | 1223 | 2015 |
| Critical assessment of metagenome interpretation—a benchmark of metagenomics software A Sczyrba, P Hofmann, P Belmann, D Koslicki, S Janssen, J Dröge, ... Nature methods 14 (11), 1063-1071, 2017 | 734 | 2017 |
| CAMISIM: simulating metagenomes and microbial communities A Fritz, P Hofmann, S Majda, E Dahms, J Dröge, J Fiedler, TR Lesker, ... Microbiome 7, 1-12, 2019 | 144 | 2019 |
| Taxator-tk: precise taxonomic assignment of metagenomes by fast approximation of evolutionary neighborhoods J Dröge, I Gregor, AC McHardy Bioinformatics 31 (6), 817-824, 2015 | 140 | 2015 |
| Taxonomic binning of metagenome samples generated by next-generation sequencing technologies J Dröge, AC McHardy Briefings in bioinformatics 13 (6), 646-655, 2012 | 129 | 2012 |
| PhyloPythiaS+: a self-training method for the rapid reconstruction of low-ranking taxonomic bins from metagenomes I Gregor, J Dröge, M Schirmer, C Quince, AC McHardy PeerJ 4, e1603, 2016 | 96 | 2016 |
| Bioboxes: standardised containers for interchangeable bioinformatics software P Belmann, J Dröge, A Bremges, AC McHardy, A Sczyrba, MD Barton Gigascience 4 (1), s13742-015-0087-0, 2015 | 95 | 2015 |
| Sewage effluent from an Indian hospital harbors novel carbapenemases and integron-borne antibiotic resistance genes NP Marathe, F Berglund, M Razavi, C Pal, J Dröge, S Samant, ... Microbiome 7, 1-11, 2019 | 86 | 2019 |
| Microbiota-directed fibre activates both targeted and secondary metabolic shifts in the distal gut L Michalak, JC Gaby, L Lagos, SL La Rosa, TR Hvidsten, C Tétard-Jones, ... Nature Communications 11 (1), 5773, 2020 | 68 | 2020 |
| Reconstructing metabolic pathways of a member of the genus Pelotomaculum suggesting its potential to oxidize benzene to carbon dioxide with direct reduction of … X Dong, J Dröge, C von Toerne, S Marozava, AC McHardy, ... FEMS Microbiology Ecology 93 (3), fiw254, 2017 | 31 | 2017 |
| Bioboxes: standardised containers for interchangeable bioinformatics software. Gigascience. 2015; 4: 47 P Belmann, J Dröge, A Bremges, AC McHardy, A Sczyrba, MD Barton PubMed Abstract| Publisher Full Text| Free Full Text, 0 | 5 | |
| Benchmark data sets, software results and reference data for the first CAMI challenge A Sczyrba, P Hofman, P Belmann, D Koslicki, S Janssen, J Dröge, ... GigaScience Database, 2017 | 4 | 2017 |
| Critical Assessment of Metagenome Interpretation–a benchmark of computational metagenomics software. bioRxiv, 99127 A Sczyrba, P Hofmann, P Belmann, D Koslicki, S Janssen, J Droege, ... Google Scholar, 2017 | 4 | 2017 |
| Engineered fibre enables targeted activation of butyrate-producing microbiota in the distal gut L Michalak, JC Gaby, L Lagos, SLL Rosa, N Terrapon, V Lombard, ... bioRxiv, 2019 | 3 | 2019 |
| Taxator-tk: Fast and Reliable Taxonomic Assignment of Metagenomes by Approximating Evolutionary Neighborhoods J Dröge, I Gregor, AC McHardy Bioinformatics, 2014 | 2 | 2014 |
| A probabilistic model to recover individual genomes from metagenomes J Dröge, A Schönhuth, AC McHardy PeerJ Computer Science 3, e117, 2017 | | 2017 |
| Computational Methods for Taxonomic Annotation and Genome Reconstruction in Metagenomics J Dröge | | 2017 |
| A probabilistic model to recover genomes in shotgun metagenomics J Dröge, A Schoenhuth, AC McHardy | | 2016 |
| Taxator-tk: fast and precise taxonomic assignment of metagenomes by approximating evolutionary neighborhoods J Dröge, I Gregor, AC McHardy arXiv preprint arXiv:1404.1029, 2014 | | 2014 |
