Johannes Dröge
Johannes Dröge
Ukjent tilknytning
Verifisert e-postadresse på uni-duesseldorf.de
Tittel
Sitert av
Sitert av
År
Structure and function of the bacterial root microbiota in wild and domesticated barley
D Bulgarelli, R Garrido-Oter, PC Münch, A Weiman, J Dröge, Y Pan, ...
Cell host & microbe 17 (3), 392-403, 2015
5032015
Critical assessment of metagenome interpretation—a benchmark of metagenomics software
A Sczyrba, P Hofmann, P Belmann, D Koslicki, S Janssen, J Dröge, ...
Nature methods 14 (11), 1063-1071, 2017
3072017
Taxonomic binning of metagenome samples generated by next-generation sequencing technologies
J Dröge, AC McHardy
Briefings in bioinformatics 13 (6), 646-655, 2012
1002012
Taxator-tk: precise taxonomic assignment of metagenomes by fast approximation of evolutionary neighborhoods
J Dröge, I Gregor, AC McHardy
Bioinformatics 31 (6), 817-824, 2015
782015
Bioboxes: standardised containers for interchangeable bioinformatics software
P Belmann, J Dröge, A Bremges, AC McHardy, A Sczyrba, MD Barton
Gigascience 4 (1), s13742-015-0087-0, 2015
762015
PhyloPythiaS+: a self-training method for the rapid reconstruction of low-ranking taxonomic bins from metagenomes
I Gregor, J Dröge, M Schirmer, C Quince, AC McHardy
PeerJ 4, e1603, 2016
602016
CAMISIM: simulating metagenomes and microbial communities
A Fritz, P Hofmann, S Majda, E Dahms, J Dröge, J Fiedler, TR Lesker, ...
Microbiome 7 (1), 1-12, 2019
192019
Sewage effluent from an Indian hospital harbors novel carbapenemases and integron-borne antibiotic resistance genes
NP Marathe, F Berglund, M Razavi, C Pal, J Dröge, S Samant, ...
Microbiome 7 (1), 97, 2019
152019
Reconstructing metabolic pathways of a member of the genus Pelotomaculum suggesting its potential to oxidize benzene to carbon dioxide with direct reduction of sulfate
X Dong, J Dröge, C von Toerne, S Marozava, AC McHardy, ...
FEMS Microbiology Ecology 93 (3), 2017
142017
Critical Assessment of Metagenome Interpretation–a benchmark of computational metagenomics software. bioRxiv, 99127
A Sczyrba, P Belmann, D Koslicki, S Janssen, J Droege, I Gregor
Google Scholar, 2017
52017
Bioboxes: standardised containers for interchangeable bioinformatics software. Gigascience. 2015; 4: 47
P Belmann, J Dröge, A Bremges, AC McHardy, A Sczyrba, MD Barton
PubMed Abstract| Publisher Full Text| Free Full Text, 0
5
Benchmark data sets, software results and reference data for the first CAMI challenge
A Sczyrba, P Hofman, P Belmann, D Koslicki, S Janssen, J Dröge, ...
GigaScience Database, 2017
42017
Taxator-tk: fast and precise taxonomic assignment of metagenomes by approximating evolutionary neighborhoods
J Dröge, I Gregor, AC McHardy
arXiv preprint arXiv:1404.1029, 2014
42014
Engineered fibre enables targeted activation of butyrate-producing microbiota in the distal gut
L Michalak, JC Gaby, L Lagos, SL La Rosa, N Terrapon, V Lombard, ...
bioRxiv, 799023, 2019
12019
Microbiota-directed fibre activates both targeted and secondary metabolic shifts in the distal gut
L Michalak, JC Gaby, L Lagos, SL La Rosa, TR Hvidsten, C Tetard-Jones, ...
bioRxiv, 799023, 2020
2020
Computational Methods for Taxonomic Annotation and Genome Reconstruction in Metagenomics
J Dröge
2017
A probabilistic model to recover individual genomes from metagenomes
J Dröge, A Schönhuth, AC McHardy
PeerJ Computer Science 3, e117, 2017
2017
A probabilistic model to recover individual genomes from metagenomes
J Dröge, A Schönhuth, AC McHardy
PeerJ Preprints, 2016
2016
A probabilistic model to recover genomes in shotgun metagenomics
J Dröge, A Schoenhuth, AC McHardy
PeerJ Preprints, 2016
2016
Bioinformatics in infection research (BIFO) 11 Toolbar
I Gregor, K Hezaveh, A Otte, JA Frank, S Hacquard
Evolution, 2016
2016
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Artikler 1–20