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Nitesh Turaga
Nitesh Turaga
Data Science, Dana Farber Cancer Institute
Verifisert e-postadresse på ds.dfci.harvard.edu - Startside
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The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2016 update
E Afgan, D Baker, M Van den Beek, D Blankenberg, D Bouvier, M Čech, ...
Nucleic acids research 44 (W1), W3-W10, 2016
20412016
A panel of novel detection and prognostic methylated DNA markers in primary non–small cell lung cancer and serum DNA
A Ooki, Z Maleki, JCJ Tsay, C Goparaju, M Brait, N Turaga, HS Nam, ...
Clinical Cancer Research 23 (22), 7141-7152, 2017
1412017
Toward a gold standard for benchmarking gene set enrichment analysis
L Geistlinger, G Csaba, M Santarelli, M Ramos, L Schiffer, N Turaga, ...
Briefings in Bioinformatics, 2020
1002020
BiocParallel: Bioconductor facilities for parallel evaluation
M Morgan, V Obenchain, M Lang, R Thompson, N Turaga
R package version 1 (1), 2014
512014
Butyrylcholinesterase in metabolic syndrome
GR Sridhar, AA Rao, K Srinivas, G Nirmala, G Lakshmi, D Suryanarayna, ...
Medical hypotheses 75 (6), 648-651, 2010
442010
High expression of SLCO2B1 is associated with prostate cancer recurrence after radical prostatectomy
T Terakawa, E Katsuta, L Yan, N Turaga, KA McDonald, M Fujisawa, ...
Oncotarget 9 (18), 14207, 2018
352018
Molecular triage of premalignant lesions in liquid-based cervical cytology and circulating cell-free DNA from urine, using a panel of methylated human papilloma virus and host …
R Guerrero-Preston, BL Valle, A Jedlicka, N Turaga, O Folawiyo, F Pirini, ...
Cancer Prevention Research 9 (12), 915-924, 2016
342016
Global Alliance for Genomics and Health Meets Bioconductor: Toward Reproducible and Agile Cancer Genomics at Cloud Scale
VJ Carey, M Ramos, BJ Stubbs, S Gopaulakrishnan, S Oh, N Turaga, ...
JCO Clinical Cancer Informatics 4, 472-479, 2020
52020
Orchestrating a community-developed computational workshop and accompanying training materials
S Davis, M Ramos, L Shepherd, N Turaga, L Geistlinger, MT Morgan, ...
F1000Research 7, 2018
22018
A guide and best practices for R/Bioconductor tool integration in Galaxy
N Turaga, MA Freeberg, D Baker, J Chilton, A Nekrutenko, J Taylor, ...
F1000Research 5 (2757), 2757, 2016
22016
The Rockerverse: Packages and Applications for Containerisation with R
D Nust, D Eddelbuettel, D Bennett, R Cannoodt, D Clark, G Daroczi, ...
R JOURNAL 12 (1), 437-461, 2020
12020
Promoter DNA methylation patterns in oral, laryngeal and oropharyngeal anatomical regions are associated with tumor differentiation, nodal involvement and survival
B Rivera‑Peña, O Folawiyo, N Turaga, RJ Rodríguez‑Benítez, ME Felici, ...
Oncology Letters 27 (3), 1-15, 2024
2024
Promoter DNA methylation patterns in oral, laryngeal, and oropharyngeal anatomical regions are associated with tumor differentiation, nodal involvement, and survival in Latinos
BI Rivera-Peña, O Folawiyo, N Turaga, RJ Rodríguez-Benítez, ME Felici, ...
Cancer Research 83 (7_Supplement), 5765-5765, 2023
2023
BioinforMagic: Marrying Galaxy and Bioconductor
N Turaga, MA Freeberg
F1000Research 5, 2016
2016
Get your own Galaxy within minutes
E Afgan, N Turaga, N Goonasekera
F1000Research 5, 2016
2016
Triage of high risk HPV positive women before colposcopy with reflex tests in pap smears and screening of high risk HPV in Transrenal DNA isolated from urine, using novel …
RE Guerrero-Preston, BL Valle, A Jedlicka, N Turaga, L Florea, ...
CANCER RESEARCH 76, 2016
2016
Viral and host gene methylation in liquid prep: novel molecular screening and triage tools to reduce cervical cancer disparities
R Guerrero-Preston, A Jedlicka, BL Valle, N Turaga, L Florea, O Folawiyo, ...
CANCER EPIDEMIOLOGY BIOMARKERS & PREVENTION 25 (3), 2016
2016
Promoter methylation, stage at presentation, and neighborhood-level effects are linked to survival disparities in HNSCC patients
FP Lawson, O Folawiyo, BL Valle, F Pirini, N Turaga, D Sidransky, ...
CANCER EPIDEMIOLOGY BIOMARKERS & PREVENTION 25 (3), 2016
2016
Genome-wide analysis identified differentially methylated regions in head and neck squamous cell carcinoma anatomic subsites
BL Rivera, O Folawiyo, N Turaga, F Pirini, R Lopez, R Vazquez, ...
CANCER RESEARCH 75, 2015
2015
bioaRchive: enabling reproducibility of Bioconductor based analyses
N Turaga
F1000Research 4, 2015
2015
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Artikler 1–20