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Paul B. Frandsen
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PartitionFinder 2: new methods for selecting partitioned models of evolution for molecular and morphological phylogenetic analyses
R Lanfear, PB Frandsen, AM Wright, T Senfeld, B Calcott
Molecular biology and evolution 34 (3), 772-773, 2017
46792017
Phylogenomics resolves the timing and pattern of insect evolution
B Misof, S Liu, K Meusemann, RS Peters, A Donath, C Mayer, ...
Science 346 (6210), 763-767, 2014
24532014
Genomic architecture and introgression shape a butterfly radiation
NB Edelman, PB Frandsen, M Miyagi, B Clavijo, J Davey, RB Dikow, ...
Science 366 (6465), 594-599, 2019
3712019
Phylogenomics reveals the evolutionary timing and pattern of butterflies and moths
AY Kawahara, D Plotkin, M Espeland, K Meusemann, EFA Toussaint, ...
Proceedings of the National Academy of Sciences 116 (45), 22657-22663, 2019
3402019
Dense sampling of bird diversity increases power of comparative genomics
S Feng, J Stiller, Y Deng, J Armstrong, QI Fang, AH Reeve, D Xie, G Chen, ...
Nature 587 (7833), 252-257, 2020
2872020
Representation and participation across 20 years of plant genome sequencing
RA Marks, S Hotaling, PB Frandsen, R VanBuren
Nature plants 7 (12), 1571-1578, 2021
1622021
Evolutionary history of Polyneoptera and its implications for our understanding of early winged insects
B Wipfler, H Letsch, PB Frandsen, P Kapli, C Mayer, D Bartel, TR Buckley, ...
Proceedings of the National Academy of Sciences 116 (8), 3024-3029, 2019
1532019
Automatic selection of partitioning schemes for phylogenetic analyses using iterative k-means clustering of site rates
PB Frandsen, B Calcott, C Mayer, R Lanfear
BMC evolutionary biology 15 (1), 1-17, 2015
1412015
Diversity and ecosystem services of Trichoptera
JC Morse, PB Frandsen, W Graf, JA Thomas
Insects 10 (5), 125, 2019
1172019
Toward a genome sequence for every animal: where are we now?
S Hotaling, JL Kelley, PB Frandsen
Proceedings of the National Academy of Sciences 118 (52), e2109019118, 2021
992021
The Trichoptera barcode initiative: a strategy for generating a species-level Tree of Life
X Zhou, PB Frandsen, RW Holzenthal, CR Beet, KR Bennett, RJ Blahnik, ...
Philosophical Transactions of the Royal Society B: Biological Sciences 371 …, 2016
942016
Response to Comment on “Phylogenomics resolves the timing and pattern of insect evolution”
KM Kjer, JL Ware, J Rust, T Wappler, R Lanfear, LS Jermiin, X Zhou, ...
Science 349 (6247), 487, 2015
922015
Deep learning as a tool for ecology and evolution
ML Borowiec, RB Dikow, PB Frandsen, A McKeeken, G Valentini, ...
Methods in Ecology and Evolution, 2022
812022
A multigene phylogeny and timeline for Trichoptera (Insecta)
JA Thomas, PB Frandsen, E Prendini, X Zhou, RW Holzenthal
Systematic Entomology 45 (3), 670-686, 2020
812020
Long-reads are revolutionizing 20 years of insect genome sequencing
S Hotaling, JS Sproul, J Heckenhauer, A Powell, AM Larracuente, ...
Genome Biology and Evolution, 2021
802021
Applications of deep convolutional neural networks to digitized natural history collections
E Schuettpelz, PB Frandsen, RB Dikow, A Brown, S Orli, M Peters, ...
Biodiversity data journal, 2017
562017
Phylogeny and classification of Odonata using targeted genomics
SM Bybee, VJ Kalkman, RJ Erickson, PB Frandsen, JW Breinholt, ...
Molecular phylogenetics and evolution 160, 107115, 2021
522021
Gene reuse facilitates rapid radiation and independent adaptation to diverse habitats in the Asian honeybee
Y Ji, X Li, T Ji, J Tang, L Qiu, J Hu, J Dong, S Luo, S Liu, PB Frandsen, ...
Science Advances 6 (51), eabd3590, 2020
452020
Aquatic insects are dramatically underrepresented in genomic research
S Hotaling, JL Kelley, PB Frandsen
Insects 11 (9), 601, 2020
402020
The genome of an underwater architect, the caddisfly Stenopsyche tienmushanensis Hwang (Insecta: Trichoptera)
S Luo, M Tang, PB Frandsen, RJ Stewart, X Zhou
Gigascience 7 (12), giy143, 2018
402018
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Articles 1–20