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Paweł P. Łabaj, PhD, DSc
Paweł P. Łabaj, PhD, DSc
Jagiellonian University, MCB; MetaSUB&SEQC; OeAW&Boku Vienna
Verified email at uj.edu.pl - Homepage
Title
Cited by
Cited by
Year
A comprehensive assessment of RNA-seq accuracy, reproducibility and information content by the Sequencing Quality Control Consortium
Z Su, PP Łabaj, S Li, J Thierry-Mieg, D Thierry-Mieg, W Shi, C Wang, ...
Nature biotechnology 32 (9), 903, 2014
8402014
The concordance between RNA-seq and microarray data depends on chemical treatment and transcript abundance
C Wang, B Gong, PR Bushel, J Thierry-Mieg, D Thierry-Mieg, J Xu, ...
Nature biotechnology 32 (9), 926-932, 2014
5092014
Detecting and correcting systematic variation in large-scale RNA sequencing data
S Li, PP Łabaj, P Zumbo, P Sykacek, W Shi, L Shi, J Phan, PY Wu, ...
Nature biotechnology 32 (9), 888-895, 2014
3672014
A global metagenomic map of urban microbiomes and antimicrobial resistance
D Danko, D Bezdan, EE Afshin, S Ahsanuddin, C Bhattacharya, DJ Butler, ...
Cell 184 (13), 3376-3393. e17, 2021
236*2021
Characterization and improvement of RNA-Seq precision in quantitative transcript expression profiling
PP Łabaj, GG Leparc, BE Linggi, LM Markillie, HS Wiley, DP Kreil
Bioinformatics 27 (13), i383-i391, 2011
1812011
Cartography of opportunistic pathogens and antibiotic resistance genes in a tertiary hospital environment
KR Chng, C Li, D Bertrand, AHQ Ng, JS Kwah, HM Low, C Tong, ...
Nature medicine 26 (6), 941-951, 2020
1602020
Assessing technical performance in differential gene expression experiments with external spike-in RNA control ratio mixtures
SA Munro, SP Lund, PS Pine, H Binder, DA Clevert, A Conesa, J Dopazo, ...
Nature Communications 5, 2014
1262014
The Metagenomics and Metadesign of the Subways and Urban Biomes (MetaSUB) International Consortium inaugural meeting report
MetaSUB International Consortium
Microbiome 4 (1), 1-14, 2016
1222016
The SARS-CoV-2 ORF10 is not essential in vitro or in vivo in humans
K Pancer, A Milewska, K Owczarek, A Dabrowska, M Kowalski, P Łabaj, ...
PLoS pathogens 16 (12), e1008959, 2020
912020
Experiences with workflows for automating data-intensive bioinformatics
O Spjuth, E Bongcam-Rudloff, GC Hernández, L Forer, M Giovacchini, ...
Biology direct 10 (1), 1-12, 2015
842015
Altered cytokine levels and immune responses in patients with SARS-CoV-2 infection and related conditions
R Noroozi, W Branicki, K Pyrc, PP Łabaj, E Pospiech, M Taheri, ...
Cytokine 133, 155143, 2020
742020
COVID-19 drug practices risk antimicrobial resistance evolution
E Afshinnekoo, C Bhattacharya, A Burguete-García, E Castro-Nallar, ...
The Lancet Microbe, 2021
672021
Angiotensin converting enzyme: A review on expression profile and its association with human disorders with special focus on SARS-CoV-2 infection
S Ghafouri-Fard, R Noroozi, MD Omrani, W Branicki, E Pośpiech, A Sayad, ...
Vascular Pharmacology, 2020
672020
Replication of severe acute respiratory syndrome coronavirus 2 in human respiratory epithelium
A Milewska, A Kula-Pacurar, J Wadas, A Suder, A Szczepanski, ...
Journal of virology 94 (15), 2020
652020
Effects of host genetic variations on response to, susceptibility and severity of respiratory infections
S Ghafouri-Fard, R Noroozi, R Vafaee, W Branicki, E Poṡpiech, K Pyrc, ...
Biomedicine & Pharmacotherapy 128, 110296, 2020
522020
The maternal ECG suppression algorithm for efficient extraction of the fetal ECG from abdominal signal
A Matonia, J Jezewski, K Horoba, A Gacek, P Labaj
Engineering in Medicine and Biology Society, 2006. EMBS'06. 28th Annual …, 2006
512006
Some practical remarks on neural networks approach to fetal cardiotocograms classification
M Jezewski, J Wrobel, P Labaj, J Leski, N Henzel, K Horoba, J Jezewski
2007 29th Annual International Conference of the IEEE Engineering in …, 2007
412007
Sensitivity, specificity, and reproducibility of RNA-Seq differential expression calls
PP Łabaj, DP Kreil
Biology direct 11 (1), 1-12, 2016
362016
Microarray profiling of preselected CHO host cell subclones identifies gene expression patterns associated with in‐creased production capacity
E Harreither, M Hackl, J Pichler, S Shridhar, N Auer, PP Łabaj, ...
Biotechnology journal 10 (10), 1625-1638, 2015
312015
A verified genomic reference sample for assessing performance of cancer panels detecting small variants of low allele frequency
W Jones, B Gong, N Novoradovskaya, D Li, R Kusko, TA Richmond, ...
Genome Biology 22 (1), 1-38, 2021
292021
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