Kai Blin
Kai Blin
Researcher at the Novo Nordisk Foundation Center for Biosustainability
Verifisert e-postadresse på biosustain.dtu.dk
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antiSMASH 3.0—a comprehensive resource for the genome mining of biosynthetic gene clusters
T Weber, K Blin, S Duddela, D Krug, HU Kim, R Bruccoleri, SY Lee, ...
Nucleic acids research 43 (W1), W237-W243, 2015
15202015
antiSMASH: rapid identification, annotation and analysis of secondary metabolite biosynthesis gene clusters in bacterial and fungal genome sequences
MH Medema, K Blin, P Cimermancic, V de Jager, P Zakrzewski, ...
Nucleic acids research 39 (suppl_2), W339-W346, 2011
11262011
antiSMASH 2.0—a versatile platform for genome mining of secondary metabolite producers
K Blin, MH Medema, D Kazempour, MA Fischbach, R Breitling, E Takano, ...
Nucleic acids research 41 (W1), W204-W212, 2013
7732013
antiSMASH 4.0—improvements in chemistry prediction and gene cluster boundary identification
K Blin, T Wolf, MG Chevrette, X Lu, CJ Schwalen, SA Kautsar, ...
Nucleic acids research 45 (W1), W36-W41, 2017
7262017
NRPSpredictor2—a web server for predicting NRPS adenylation domain specificity
M Röttig, MH Medema, K Blin, T Weber, C Rausch, O Kohlbacher
Nucleic acids research 39 (suppl_2), W362-W367, 2011
4972011
antiSMASH 5.0: updates to the secondary metabolite genome mining pipeline
K Blin, S Shaw, K Steinke, R Villebro, N Ziemert, SY Lee, MH Medema, ...
Nucleic acids research 47 (W1), W81-W87, 2019
4922019
Minimum information about a biosynthetic gene cluster
MH Medema, R Kottmann, P Yilmaz, M Cummings, JB Biggins, K Blin, ...
Nature chemical biology 11 (9), 625-631, 2015
4382015
The antiSMASH database, a comprehensive database of microbial secondary metabolite biosynthetic gene clusters
K Blin, MH Medema, R Kottmann, SY Lee, T Weber
Nucleic acids research, gkw960, 2016
1562016
DoRiNA 2.0—upgrading the doRiNA database of RNA interactions in post-transcriptional regulation
K Blin, C Dieterich, R Wurmus, N Rajewsky, M Landthaler, A Akalin
Nucleic acids research 43 (D1), D160-D167, 2015
932015
Dissemination of antibiotic resistance genes from antibiotic producers to pathogens
X Jiang, MMH Ellabaan, P Charusanti, C Munck, K Blin, Y Tong, T Weber, ...
Nature communications 8 (1), 1-7, 2017
922017
plantiSMASH: automated identification, annotation and expression analysis of plant biosynthetic gene clusters
SA Kautsar, HG Suarez Duran, K Blin, A Osbourn, MH Medema
Nucleic acids research 45 (W1), W55-W63, 2017
702017
The Antibiotic Resistant Target Seeker (ARTS), an exploration engine for antibiotic cluster prioritization and novel drug target discovery
M Alanjary, B Kronmiller, M Adamek, K Blin, T Weber, D Huson, B Philmus, ...
Nucleic acids research 45 (W1), W42-W48, 2017
652017
Ten Simple Rules for Taking Advantage of git and GitHub
Y Perez-Riverol, L Gatto, R Wang, T Sachsenberg, J Uszkoreit, ...
PLOS Computational Biology, 2016
642016
CRISPy-web: An online resource to design sgRNAs for CRISPR applications
K Blin, LE Pedersen, T Weber, SY Lee
Synthetic and Systems Biotechnology 1 (2), 118-121, 2016
632016
The antiSMASH database version 2: a comprehensive resource on secondary metabolite biosynthetic gene clusters
K Blin, V Pascal Andreu, ELC de los Santos, F Del Carratore, SY Lee, ...
Nucleic acids research 47 (D1), D625-D630, 2019
532019
Improved lanthipeptide detection and prediction for antiSMASH
K Blin, D Kazempour, W Wohlleben, T Weber
PLoS One 9 (2), e89420, 2014
432014
MIBiG 2.0: a repository for biosynthetic gene clusters of known function
SA Kautsar, K Blin, S Shaw, JC Navarro-Muñoz, BR Terlouw, ...
Nucleic acids research 48 (D1), D454-D458, 2020
392020
Recent development of antiSMASH and other computational approaches to mine secondary metabolite biosynthetic gene clusters
K Blin, HU Kim, MH Medema, T Weber
Briefings in Bioinformatics 20 (4), 1103-1113, 2019
342019
Complete genome sequence of the kirromycin producer Streptomyces collinus Tü 365 consisting of a linear chromosome and two linear plasmids
C Rückert, R Szczepanowski, A Albersmeier, A Goesmann, D Iftime, ...
Journal of Biotechnology, 2013
232013
Highly efficient DSB-free base editing for streptomycetes with CRISPR-BEST
Y Tong, CM Whitford, HL Robertsen, K Blin, TS Jørgensen, AK Klitgaard, ...
Proceedings of the National Academy of Sciences 116 (41), 20366-20375, 2019
222019
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Artikler 1–20