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Jaroslaw Zola
Jaroslaw Zola
Associate Professor of Computer Science, University at Buffalo, SUNY
Verifisert e-postadresse på buffalo.edu - Startside
Tittel
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A brassinosteroid transcriptional network revealed by genome‐wide identification of BESI target genes in Arabidopsis thaliana
X Yu, L Li, J Zola, M Aluru, H Ye, A Foudree, H Guo, S Anderson, S Aluru, ...
The Plant Journal 65 (4), 634-646, 2011
5452011
Large-scale maximum likelihood-based phylogenetic analysis on the IBM BlueGene/L
M Ott, J Zola, A Stamatakis, S Aluru
SC'07: Proceedings of the 2007 ACM/IEEE Conference on Supercomputing, 1-11, 2007
1622007
Chloroplast photooxidation-induced transcriptome reprogramming in Arabidopsis immutans white leaf sectors
MR Aluru, J Zola, A Foudree, SR Rodermel
Plant Physiology 150 (2), 904-923, 2009
822009
PARALLEL-TCOFFEE: A parallel multiple sequence aligner.
J Zola, X Yang, A Rospondek, S Aluru
ISCA PDCS 2007, 248-253, 2007
582007
Parallel information-theory-based construction of genome-wide gene regulatory networks
J Zola, M Aluru, A Sarje, S Aluru
IEEE Transactions on Parallel and Distributed Systems 21 (12), 1721-1733, 2010
432010
Reverse engineering and analysis of large genome-scale gene networks
M Aluru, J Zola, D Nettleton, S Aluru
Nucleic acids research 41 (1), e24-e24, 2013
382013
Parallel metagenomic sequence clustering via sketching and maximal quasi-clique enumeration on map-reduce clouds
X Yang, J Zola, S Aluru
2011 IEEE International Parallel & Distributed Processing Symposium, 1223-1233, 2011
362011
Nucleosome positioning and composition modulate in silico chromatin flexibility
N Clauvelin, P Lo, OI Kulaeva, EV Nizovtseva, J Diaz-Montes, J Zola, ...
Journal of Physics: Condensed Matter 27 (6), 064112, 2015
332015
Automated, high throughput exploration of process–structure–property relationships using the mapreduce paradigm
O Wodo, J Zola, BSS Pokuri, P Du, B Ganapathysubramanian
Materials Discovery 1, 21-28, 2015
332015
Parallel globally optimal structure learning of Bayesian networks
O Nikolova, J Zola, S Aluru
Journal of Parallel and Distributed Computing 73 (8), 1039-1048, 2013
232013
Large-scale phylogenetic analysis on current HPC architectures
M Ott, J Zola, S Aluru, AD Johnson, D Janies, A Stamatakis
Scientific Programming 16 (2), 255-270, 2008
222008
Parallel information theory based construction of gene regulatory networks
J Zola, M Aluru, S Aluru
International Conference on High-Performance Computing, 336-349, 2008
202008
A parallel algorithm for exact Bayesian network inference
O Nikolova, J Zola, S Aluru
2009 International Conference on High Performance Computing (HiPC), 342-349, 2009
172009
Error metrics for learning reliable manifolds from streaming data
F Schoeneman, S Mahapatra, V Chandola, N Napp, J Zola
Proceedings of the 2017 SIAM International Conference on Data Mining, 750-758, 2017
152017
Federated Computing for the Masses--Aggregating Resources to Tackle Large-Scale Engineering Problems
J Diaz-Montes, Y Xie, I Rodero, J Zola, B Ganapathysubramanian, ...
Computing in Science & Engineering 16 (4), 62-72, 2014
152014
Exploring the use of elastic resource federations for enabling large-scale scientific workflows
J Diaz-Montes, Y Xie, I Rodero, J Zola, B Ganapathysubramanian, ...
Proc. of Workshop on Many-Task Computing on Clouds, Grids, and …, 2013
132013
Accelerating pairwise computations on cell processors
A Sarje, J Zola, S Aluru
IEEE Transactions on Parallel and Distributed Systems 22 (1), 69-77, 2010
132010
Parallel multiple sequence alignment with local phylogeny search by simulated annealing
J Zola, D Trystram, A Tchernykh, C Brizuela
Proceedings 20th IEEE International Parallel & Distributed Processing …, 2006
132006
Large-scale metagenomic sequence clustering on map-reduce clusters
X Yang, J Zola, S Aluru
Journal of bioinformatics and computational biology 11 (01), 1340001, 2013
122013
Large scale multiple sequence alignment with simultaneous phylogeny inference
G Parmentier, D Trystram, J Zola
Journal of Parallel and Distributed Computing 66 (12), 1534-1545, 2006
122006
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Artikler 1–20