Torbjørn Rognes
Torbjørn Rognes
Dept. of Informatics, University of Oslo & Dept. of Microbiology, Oslo University Hospital
Verified email at - Homepage
Cited by
Cited by
VSEARCH: a versatile open source tool for metagenomics
T Rognes, T Flouri, B Nichols, C Quince, F Mahé
PeerJ 4, e2584, 2016
RNAmmer: consistent and rapid annotation of ribosomal RNA genes
K Lagesen, P Hallin, EA Rødland, HH Stærfeldt, T Rognes, DW Ussery
Nucleic Acids Research 35 (9), 3100-3108, 2007
Swarm: robust and fast clustering method for amplicon-based studies
F Mahé, T Rognes, C Quince, C de Vargas, M Dunthorn
PeerJ 2, 593, 2014
DNA repair in mammalian cells: Base excision repair: the long and short of it
AB Robertson, A Klungland, T Rognes, I Leiros
Cellular and molecular life sciences 66, 981-993, 2009
Swarm v2: highly-scalable and high-resolution amplicon clustering
F Mahé, T Rognes, C Quince, C De Vargas, M Dunthorn
PeerJ 3, e1420, 2015
Opposite base‐dependent reactions of a human base excision repair enzyme on DNA containing 7, 8‐dihydro‐8‐oxoguanine and abasic sites
M Bjørås, L Luna, B Johnsen, E Hoff, T Haug, T Rognes, E Seeberg
The EMBO journal, 1997
Human DNA glycosylases of the bacterial Fpg/MutM superfamily: an alternative pathway for the repair of 8‐oxoguanine and other oxidation products in DNA
I Morland, V Rolseth, L Luna, T Rognes, M Bjørås, E Seeberg
Nucleic acids research 30 (22), 4926-4936, 2002
Six-fold speed-up of Smith–Waterman sequence database searches using parallel processing on common microprocessors
T Rognes, E Seeberg
Bioinformatics 16 (8), 699-706, 2000
Faster Smith-Waterman database searches with inter-sequence SIMD parallelisation
T Rognes
BMC Bioinformatics 12 (1), 221, 2011
The Saccharomyces cerevisiae homologues of endonuclease III from Escherichia coli, Ntg1 and Ntg2, are both required for efficient repair of spontaneous and induced oxidative …
I Alseth, L Eide, M Pirovano, T Rognes, E Seeberg, M Bjørås
Molecular and cellular biology, 1999
Open-source sequence clustering methods improve the state of the art
E Kopylova, JA Navas-Molina, C Mercier, ZZ Xu, F Mahé, Y He, HW Zhou, ...
MSystems 1 (1), 10.1128/msystems. 00003-15, 2016
Genome dynamics in major bacterial pathogens
OH Ambur, T Davidsen, SA Frye, SV Balasingham, K Lagesen, T Rognes, ...
FEMS microbiology reviews 33 (3), 453-470, 2009
ALKBH1 is a histone H2A dioxygenase involved in neural differentiation
R Ougland, D Lando, I Jonson, JA Dahl, MN Moen, LM Nordstrand, ...
Stem cells 30 (12), 2672-2682, 2012
Biased distribution of DNA uptake sequences towards genome maintenance genes
T Davidsen, EA Rødland, K Lagesen, E Seeberg, T Rognes, T Tønjum
Nucleic acids research 32 (3), 1050-1058, 2004
ParAlign: a parallel sequence alignment algorithm for rapid and sensitive database searches
T Rognes
Nucleic acids research 29 (7), 1647-1652, 2001
Cell-cycle regulation, intracellular sorting and induced overexpression of the human NTH1 DNA glycosylase involved in removal of formamidopyrimidine residues from DNA
L Luna, M Bjørås, E Hoff, T Rognes, E Seeberg
Mutation Research/DNA Repair 460 (2), 95-104, 2000
Determination of optimal local sequence alignment similarity score
T Rognes
US Patent 7,917,302, 2011
Characterization of novel mutations in the catalytic domain of the PCSK9 gene
J Cameron, ØL Holla, JK Laerdahl, MA Kulseth, T Ranheim, T Rognes, ...
Journal of internal medicine 263 (4), 420-431, 2008
Incision at hypoxanthine residues in DNA by a mammalian homologue of the Escherichia coli antimutator enzyme endonuclease V
A Moe, J Ringvoll, LM Nordstrand, L Eide, M Bjørås, E Seeberg, ...
Nucleic acids research 31 (14), 3893-3900, 2003
Continuous and periodic expansion of CAG repeats in Huntington's disease R6/1 mice
L Møllersen, AD Rowe, E Larsen, T Rognes, A Klungland
PLoS genetics 6 (12), e1001242, 2010
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