| Femtosecond dynamics of rubredoxin: Tryptophan solvation and resonance energy transfer in the protein D Zhong, SK Pal, D Zhang, SI Chan, AH Zewail Proceedings of the National Academy of Sciences 99 (1), 13-18, 2002 | 148 | 2002 |
| Computation of electrostatic forces between solvated molecules determined by the Poisson–Boltzmann equation using a boundary element method B Lu, D Zhang, JA McCammon The Journal of chemical physics 122 (21), 214102, 2005 | 143 | 2005 |
| Protein dynamics in a family of laboratory evolved thermophilic enzymes PL Wintrode, D Zhang, N Vaidehi, FH Arnold, WA Goddard III Journal of molecular biology 327 (3), 745-757, 2003 | 127 | 2003 |
| Potentials of mean force for acetylcholine unbinding from the alpha7 nicotinic acetylcholine receptor ligand-binding domain D Zhang, J Gullingsrud, JA McCammon Journal of the American Chemical Society 128 (9), 3019-3026, 2006 | 113 | 2006 |
| Electrostatic properties of cowpea chlorotic mottle virus and cucumber mosaic virus capsids R Konecny, J Trylska, F Tama, D Zhang, NA Baker, CL Brooks III, ... Biopolymers: Original Research on Biomolecules 82 (2), 106-120, 2006 | 85 | 2006 |
| Electrostatic interaction between RNA and protein capsid in cowpea chlorotic mottle virus simulated by a coarse‐grain RNA model and a Monte Carlo approach D Zhang, R Konecny, NA Baker, JA McCammon Biopolymers: Original Research on Biomolecules 75 (4), 325-337, 2004 | 81 | 2004 |
| Finite element analysis of the time-dependent Smoluchowski equation for acetylcholinesterase reaction rate calculations Y Cheng, JK Suen, D Zhang, SD Bond, Y Zhang, Y Song, NA Baker, ... Biophysical journal 92 (10), 3397-3406, 2007 | 50 | 2007 |
| Structure-based design of mutant Methanococcus jannaschii tyrosyl-tRNA synthetase for incorporation of O-methyl-L-tyrosine D Zhang, N Vaidehi, WA Goddard, JF Danzer, D Debe Proceedings of the National Academy of Sciences 99 (10), 6579-6584, 2002 | 39 | 2002 |
| Tetrameric mouse acetylcholinesterase: continuum diffusion rate calculations by solving the steady-state Smoluchowski equation using finite element methods D Zhang, J Suen, Y Zhang, Y Song, Z Radic, P Taylor, MJ Holst, C Bajaj, ... Biophysical journal 88 (3), 1659-1665, 2005 | 38 | 2005 |
| The association of tetrameric acetylcholinesterase with ColQ tail: a block normal mode analysis D Zhang, JA McCammon PLoS Comput Biol 1 (6), e62, 2005 | 25 | 2005 |
| Selectivity and specificity of substrate binding in methionyl‐tRNA synthetase D Datta, N Vaidehi, D Zhang, WA Goddard III Protein science 13 (10), 2693-2705, 2004 | 18 | 2004 |
| Kinetics for the reaction of hydroxyl radicals with CH~ 3Br and its implications in the atmosphere D Zhang, J Zhong, L Qiu JOURNAL OF ENVIRONMENTAL SCIENCES CHINA-ENGLISH EDITION- 9, 480-485, 1997 | 16 | 1997 |
| Kinetics of the reaction of hydroxyl radicals with CH2Br2 and its implications in the atmosphere D Zhang, J Zhong, L Qiu Journal of atmospheric chemistry 27 (2), 209-215, 1997 | 15 | 1997 |
| Fidelity of seryl-tRNA synthetase to binding of natural amino acids from HierDock first principles computations CL McClendon, N Vaidehi, VWT Kam, D Zhang, WA Goddard III Protein Engineering Design and Selection 19 (5), 195-203, 2006 | 13 | 2006 |
| Laser-induced fluorescence spectrum of PH2 cooled in a supersonic jet Y Chen, Q Zhang, D Zhang, C Chen, S Yu, X Ma Chemical physics letters 223 (1-2), 104-109, 1994 | 11 | 1994 |
| COP protein design tool W Goddard, N Vaidehi, D Zhang US Patent App. 10/414,452, 2006 | 5 | 2006 |
| Ligand unbinding in the nicotinic acetylcholine receptor by steered molecular dynamics D Zhang, J McCammon PROTEIN SCIENCE 13, 101-101, 2004 | | 2004 |
| The cop protein design tool WA Goddard, N Vaidehi, D Zhang | | 2003 |
| Structure-based design of mutant proteins: I. Molecular docking studies of amino acid binding to wild-type aminoacyl-tRNA synthetases. II. Structure-based design of mutant … D Zhang California Institute of Technology, 2003 | | 2003 |
| Calculations of Ozone Depletion Potentials of Brominated Alkanes. Z Jinxian, Z Deqiang CHINESE JOURNAL OF ENVIROMENTAL SCIENCE 2, 1997 | | 1997 |
Prof. J. Andrew McCammonUniversity of California, San DiegoVerified email at ucsd.edu
