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Wolfgang Huber
Wolfgang Huber
EMBL - European Molecular Biology Laboratory
Verifisert e-postadresse på embl.org - Startside
Tittel
Sitert av
Sitert av
År
Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2
MI Love, W Huber, S Anders
Genome Biology 15 (12), 1-21, 2014
737292014
HTSeq—a Python framework to work with high-throughput sequencing data
S Anders, PT Pyl, W Huber
Bioinformatics 31 (2), 166-169, 2015
203162015
Differential expression analysis for sequence count data
S Anders, W Huber
Genome Biology 11, R106, 2010
173382010
Bioconductor: open software development for computational biology and bioinformatics
RC Gentleman, VJ Carey, DM Bates, B Bolstad, M Dettling, S Dudoit, ...
Genome Biology 5 (10), 1-16, 2004
143942004
Enterotypes of the human gut microbiome
M Arumugam, J Raes, E Pelletier, D Le Paslier, T Yamada, DR Mende, ...
Nature 473 (7346), 174-180, 2011
86432011
Software for computing and annotating genomic ranges
M Lawrence, W Huber, H Pagès, P Aboyoun, M Carlson, R Gentleman, ...
PLoS computational biology 9 (8), e1003118, 2013
39992013
Mapping identifiers for the integration of genomic datasets with the R/Bioconductor package biomaRt
S Durinck, PT Spellman, E Birney, W Huber
Nature protocols 4 (8), 1184-1191, 2009
37302009
Orchestrating high-throughput genomic analysis with Bioconductor
W Huber, VJ Carey, R Gentleman, S Anders, M Carlson, BS Carvalho, ...
Nature Methods 12 (2), 115-121, 2015
36412015
Bioinformatics and computational biology solutions using R and Bioconductor
R Gentleman, VJ Carey, W Huber, RA Irizarry, S Dudoit
Springer, 2005
36032005
gplots: Various R programming tools for plotting data
GR Warnes, B Bolker, L Bonebakker, R Gentleman, W Huber, A Liaw, ...
R package version 2 (4), 1, 2009
29502009
Variance stabilization applied to microarray data calibration and to the quantification of differential expression
W Huber, A Von Heydebreck, H Sültmann, A Poustka, M Vingron
Bioinformatics 18 (suppl_1), S96-S104, 2002
28992002
BioMart and Bioconductor: a powerful link between biological databases and microarray data analysis
S Durinck, Y Moreau, A Kasprzyk, S Davis, B De Moor, A Brazma, ...
Bioinformatics 21 (16), 3439-3440, 2005
22742005
Pan-cancer analysis of whole genomes
Nature 578 (7793), 82-93, 2020
1930*2020
Detecting differential usage of exons from RNA-seq data
S Anders, A Reyes, W Huber
Genome Research 22, 2008, 2012
17912012
Count-based differential expression analysis of RNA sequencing data using R and Bioconductor
S Anders, DJ McCarthy, Y Chen, M Okoniewski, GK Smyth, W Huber, ...
Nature protocols 8 (9), 1765-1786, 2013
13322013
Two independent modes of chromatin organization revealed by cohesin removal
W Schwarzer, N Abdennur, A Goloborodko, A Pekowska, G Fudenberg, ...
Nature 551 (7678), 51-56, 2017
11272017
Bidirectional promoters generate pervasive transcription in yeast
Z Xu, W Wei, J Gagneur, F Perocchi, S Clauder-Münster, J Camblong, ...
Nature 457 (7232), 1033-1037, 2009
10842009
arrayQualityMetrics—a bioconductor package for quality assessment of microarray data
A Kauffmann, R Gentleman, W Huber
Bioinformatics 25 (3), 415-416, 2009
10612009
Human haematopoietic stem cell lineage commitment is a continuous process
L Velten, SF Haas, S Raffel, S Blaszkiewicz, S Islam, BP Hennig, C Hirche, ...
Nature cell biology 19 (4), 271-281, 2017
10042017
Multi‐Omics Factor Analysis—a framework for unsupervised integration of multi‐omics data sets
R Argelaguet, B Velten, D Arnol, S Dietrich, T Zenz, JC Marioni, F Buettner, ...
Molecular systems biology 14 (6), e8124, 2018
9772018
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Artikler 1–20