Sandrine Dudoit
Sandrine Dudoit
Division of Biostatistics and Department of Statistics, University of California, Berkeley
Verifisert e-postadresse på stat.berkeley.edu - Startside
Tittel
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Bioconductor: open software development for computational biology and bioinformatics
RC Gentleman, VJ Carey, DM Bates, B Bolstad, M Dettling, S Dudoit, ...
Genome biology 5 (10), R80, 2004
122122004
Normalization for cDNA microarray data: a robust composite method addressing single and multiple slide systematic variation
YH Yang, S Dudoit, P Luu, DM Lin, V Peng, J Ngai, TP Speed
Nucleic acids research 30 (4), e15-e15, 2002
42072002
Comparison of discrimination methods for the classification of tumors using gene expression data
S Dudoit, J Fridlyand, TP Speed
Journal of the American statistical association 97 (457), 77-87, 2002
32482002
Bioinformatics and computational biology solutions using R and Bioconductor
R Gentleman, V Carey, W Huber, R Irizarry, S Dudoit
Springer Science & Business Media, 2006
29092006
Statistical methods for identifying differentially expressed genes in replicated cDNA microarray experiments
S Dudoit, YH Yang, MJ Callow, TP Speed
Statistica sinica, 111-139, 2002
20252002
Evaluation of statistical methods for normalization and differential expression in mRNA-Seq experiments
JH Bullard, E Purdom, KD Hansen, S Dudoit
BMC bioinformatics 11 (1), 1-13, 2010
16472010
The developmental transcriptome of Drosophila melanogaster
BR Graveley, AN Brooks, JW Carlson, MO Duff, JM Landolin, L Yang, ...
Nature 471 (7339), 473-479, 2011
13482011
Multiple hypothesis testing in microarray experiments
S Dudoit, JP Shaffer, JC Boldrick
Statistical Science, 71-103, 2003
13092003
Diversity, topographic differentiation, and positional memory in human fibroblasts
HY Chang, JT Chi, S Dudoit, C Bondre, M van de Rijn, D Botstein, ...
Proceedings of the National Academy of Sciences 99 (20), 12877-12882, 2002
11452002
Normalization of RNA-seq data using factor analysis of control genes or samples
D Risso, J Ngai, TP Speed, S Dudoit
Nature biotechnology 32 (9), 896-902, 2014
9152014
Gene expression patterns in human liver cancers
X Chen, ST Cheung, S So, ST Fan, C Barry, J Higgins, KM Lai, J Ji, ...
Molecular biology of the cell 13 (6), 1929-1939, 2002
9062002
A prediction-based resampling method for estimating the number of clusters in a dataset
S Dudoit, J Fridlyand
Genome biology 3 (7), research0036. 1, 2002
8992002
Identification of functional elements and regulatory circuits by Drosophila modENCODE
S Roy, J Ernst, PV Kharchenko, P Kheradpour, N Negre, ML Eaton, ...
Science 330 (6012), 1787-1797, 2010
8822010
Multiple testing procedures with applications to genomics
S Dudoit, MJ Van Der Laan
Springer Science & Business Media, 2007
756*2007
GC-content normalization for RNA-Seq data
D Risso, K Schwartz, G Sherlock, S Dudoit
BMC bioinformatics 12 (1), 480, 2011
7322011
Biases in Illumina transcriptome sequencing caused by random hexamer priming
KD Hansen, SE Brenner, S Dudoit
Nucleic acids research 38 (12), e131-e131, 2010
7102010
Comparison of methods for image analysis on cDNA microarray data
YH Yang, MJ Buckley, S Dudoit, TP Speed
Journal of computational and graphical statistics 11 (1), 108-136, 2002
6692002
Survival ensembles
T Hothorn, P Bühlmann, S Dudoit, A Molinaro, MJ Van Der Laan
Biostatistics 7 (3), 355-373, 2006
6292006
Resampling-based multiple testing for microarray data analysis
Y Ge, S Dudoit, TP Speed
Test 12 (1), 1-77, 2003
6252003
Normalization for cDNA microarry data
YH Yang, S Dudoit, P Luu, TP Speed
Microarrays: optical technologies and informatics 4266, 141-152, 2001
6232001
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Artikler 1–20