Felipe Hernandes Coutinho
Felipe Hernandes Coutinho
Institute of Marine Sciences, CSIC, Spain
Verified email at - Homepage
Cited by
Cited by
Lytic to temperate switching of viral communities
B Knowles, CB Silveira, BA Bailey, K Barott, VA Cantu, ...
Nature 531 (7595), 466-470, 2016
Robust taxonomic classification of uncharted microbial sequences and bins with CAT and BAT
FAB Von Meijenfeldt, K Arkhipova, DD Cambuy, FH Coutinho, BE Dutilh
Genome biology 20, 1-14, 2019
Marine viruses discovered via metagenomics shed light on viral strategies throughout the oceans
FH Coutinho, CB Silveira, GB Gregoracci, CC Thompson, RA Edwards, ...
Nature communications 8 (1), 15955, 2017
Environmental and sanitary conditions of Guanabara Bay, Rio de Janeiro
GO Fistarol, FH Coutinho, APB Moreira, T Venas, A Cánovas, ...
Frontiers in microbiology 6, 1232, 2015
Ecogenomics and taxonomy of Cyanobacteria phylum
JM Walter, FH Coutinho, BE Dutilh, J Swings, FL Thompson, ...
Frontiers in Microbiology 8, 2132, 2017
Genomes of novel microbial lineages assembled from the sub-ice waters of Lake Baikal
PJ Cabello-Yeves, TI Zemskaya, R Rosselli, FH Coutinho, AS Zakharenko, ...
Applied and environmental microbiology 84 (1), e02132-17, 2018
Metagenomics sheds light on the ecology of marine microbes and their viruses
FH Coutinho, GB Gregoracci, JM Walter, CC Thompson, FL Thompson
Trends in microbiology 26 (11), 955-965, 2018
RaFAH: Host prediction for viruses of Bacteria and Archaea based on protein content
FH Coutinho, A Zaragoza-Solas, M López-Pérez, J Barylski, A Zielezinski, ...
Patterns 2 (7), 2021
Thousands of novel endolysins discovered in uncultured phage genomes
I Fernández-Ruiz, FH Coutinho, F Rodriguez-Valera
Frontiers in microbiology 9, 1033, 2018
Antibiotic resistance is widespread in urban aquatic environments of Rio de Janeiro, Brazil
FH Coutinho, CB Silveira, LH Pinto, GRB Salloto, AM Cardoso, ...
Microbial ecology 68, 441-452, 2014
iPHoP: An integrated machine learning framework to maximize host prediction for metagenome-derived viruses of archaea and bacteria
S Roux, AP Camargo, FH Coutinho, SM Dabdoub, BE Dutilh, S Nayfach, ...
PLoS biology 21 (4), e3002083, 2023
Comparative genomics of Synechococcus and proposal of the new genus Parasynechococcus
F Coutinho, DA Tschoeke, F Thompson, C Thompson
PeerJ 4, e1522, 2016
Nasopharyngeal microbial communities of patients infected with SARS-CoV-2 that developed COVID-19
MP Ventero, RRC Cuadrat, I Vidal, BGN Andrade, C Molina-Pardines, ...
Frontiers in microbiology 12, 560, 2021
Multi-species host range of staphylococcal phages isolated from wastewater
PC Göller, T Elsener, D Lorgé, N Radulovic, V Bernardi, A Naumann, ...
Nature Communications 12 (1), 6965, 2021
New viral biogeochemical roles revealed through metagenomic analysis of Lake Baikal
FH Coutinho, PJ Cabello-Yeves, R Gonzalez-Serrano, R Rosselli, ...
Microbiome 8 (1), 1-15, 2020
Diversity and antibiotic resistance profiles of Pseudomonads from a hospital wastewater treatment plant
DO Santoro, AM Cardoso, FH Coutinho, LH Pinto, RP Vieira, RM Albano, ...
Journal of applied microbiology 119 (6), 1527-1540, 2015
Niche distribution and influence of environmental parameters in marine microbial communities: a systematic review
FH Coutinho, PM Meirelles, APB Moreira, RP Paranhos, BE Dutilh, ...
PeerJ 3, e1008, 2015
Ecological and genomic features of two widespread freshwater picocyanobacteria
PJ Cabello‐Yeves, A Picazo, A Camacho, C Callieri, R Rosselli, ...
Environmental microbiology 20 (10), 3757-3771, 2018
Insights of phage-host interaction in hypersaline ecosystem through metagenomics analyses
AM Motlagh, AS Bhattacharjee, FH Coutinho, BE Dutilh, SR Casjens, ...
Frontiers in microbiology 8, 352, 2017
Genomic and ecological attributes of marine bacteriophages encoding bacterial virulence genes
CB Silveira, FH Coutinho, GS Cavalcanti, S Benler, MP Doane, ...
BMC genomics 21 (1), 1-11, 2020
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