iRegulon: from a gene list to a gene regulatory network using large motif and track collections R Janky, A Verfaillie, H Imrichová, B Van de Sande, L Standaert, ... PLoS computational biology 10 (7), e1003731, 2014 | 843 | 2014 |
i-cisTarget: an integrative genomics method for the prediction of regulatory features and cis-regulatory modules C Herrmann, B Van de Sande, D Potier, S Aerts Nucleic acids research 40 (15), e114-e114, 2012 | 203 | 2012 |
i-cisTarget 2015 update: generalized cis-regulatory enrichment analysis in human, mouse and fly H Imrichová, G Hulselmans, Z Kalender Atak, D Potier, S Aerts Nucleic acids research 43 (W1), W57-W64, 2015 | 185 | 2015 |
Discovery of Transcription Factors and Regulatory Regions Driving In Vivo Tumor Development by ATAC-seq and FAIRE-seq Open Chromatin Profiling K Davie, J Jacobs, M Atkins, D Potier, V Christiaens, G Halder, S Aerts PLoS genetics 11 (2), e1004994, 2015 | 184 | 2015 |
The transcription factor Grainy head primes epithelial enhancers for spatiotemporal activation by displacing nucleosomes J Jacobs, M Atkins, K Davie, H Imrichova, L Romanelli, V Christiaens, ... Nature genetics 50 (7), 1011-1020, 2018 | 151 | 2018 |
Single-cell profiling identifies pre-existing CD19-negative subclones in a B-ALL patient with CD19-negative relapse after CAR-T therapy T Rabilloud, D Potier, S Pankaew, M Nozais, M Loosveld, D Payet-Bornet Nature communications 12 (1), 865, 2021 | 111 | 2021 |
An ectopic network of transcription factors regulated by hippo signaling drives growth and invasion of a malignant tumor model M Atkins, D Potier, L Romanelli, J Jacobs, J Mach, F Hamaratoglu, S Aerts, ... Current Biology 26 (16), 2101-2113, 2016 | 96 | 2016 |
Mapping gene regulatory networks in Drosophila eye development by large-scale transcriptome perturbations and motif inference D Potier, K Davie, G Hulselmans, MN Sanchez, L Haagen, D Koldere, ... Cell reports 9 (6), 2290-2303, 2014 | 82 | 2014 |
Cortical neurogenesis requires Bcl6-mediated transcriptional repression of multiple self-renewal-promoting extrinsic pathways J Bonnefont, L Tiberi, J Van Den Ameele, D Potier, ZB Gaber, X Lin, ... Neuron 103 (6), 1096-1108. e4, 2019 | 53 | 2019 |
Altering the temporal regulation of one transcription factor drives evolutionary trade-offs between head sensory organs A Ramaekers, A Claeys, M Kapun, E Mouchel-Vielh, D Potier, ... Developmental cell 50 (6), 780-792. e7, 2019 | 45 | 2019 |
Comparative motif discovery combined with comparative transcriptomics yields accurate targetome and enhancer predictions M Naval-Sánchez, D Potier, L Haagen, M Sánchez, S Munck, ... Genome research 23 (1), 74-88, 2013 | 33 | 2013 |
Using cisTargetX to Predict Transcriptional Targets and Networks in Drosophila D Potier, ZK Atak, MN Sanchez, C Herrmann, S Aerts Gene Regulatory Networks: Methods and Protocols, 291-314, 2012 | 18 | 2012 |
Nuclear receptors connect progenitor transcription factors to cell cycle control M Neto, M Naval-Sánchez, D Potier, PS Pereira, D Geerts, S Aerts, ... Scientific reports 7 (1), 4845, 2017 | 16 | 2017 |
dachshund Potentiates Hedgehog Signaling during Drosophila Retinogenesis C Brás-Pereira, D Potier, J Jacobs, S Aerts, F Casares, F Janody PLoS Genetics 12 (7), e1006204, 2016 | 16 | 2016 |
Identification of cis-regulatory modules encoding temporal dynamics during development D Potier, D Seyres, C Guichard, M Iche-Torres, S Aerts, C Herrmann, ... BMC genomics 15, 1-15, 2014 | 15 | 2014 |
Identification of Lineage-Specific Cis-Regulatory Modules Associated with Variation in Transcription Factor Binding and Chromatin Activity Using Ornstein … M Naval-Sánchez, D Potier, G Hulselmans, V Christiaens, S Aerts Molecular biology and evolution 32 (9), 2441-2455, 2015 | 14 | 2015 |
GATA1 pathogenic variants disrupt MYH10 silencing during megakaryopoiesis P Saultier, S Cabantous, M Puceat, F Peiretti, T Bigot, N Saut, JC Bordet, ... Journal of Thrombosis and Haemostasis 19 (9), 2287-2301, 2021 | 10 | 2021 |
MYC deficiency impairs the development of effector/memory T lymphocytes M Nozais, M Loosveld, S Pankaew, C Grosjean, N Gentil, J Quessada, ... Iscience 24 (7), 2021 | 10 | 2021 |
Single‐cell transcriptomics uncovers an instructive T‐cell receptor role in adult γδ T‐cell lineage commitment S Scaramuzzino, D Potier, R Ordioni, P Grenot, D Payet‐Bornet, H Luche, ... The EMBO Journal 41 (5), e110023, 2022 | 7 | 2022 |
Fit αβ T-cell receptor suppresses leukemogenesis of Pten-deficient thymocytes S Gon, M Loosveld, T Crouzet, D Potier, M Bonnet, SO Morin, G Michel, ... haematologica 103 (6), 999, 2018 | 7 | 2018 |