| Pattern recognition techniques in microarray data analysis: a survey F Valafar Annals of the New York Academy of Sciences 980 (1), 41-64, 2002 | 216 | 2002 |
| Cryptococcus neoformans Chemotyping by Quantitative Analysis of 1H Nuclear Magnetic Resonance Spectra of Glucuronoxylomannans with a Computer … R Cherniak, H Valafar, LC Morris, F Valafar Clinical Diagnostic Laboratory Immunology 5 (2), 146-159, 1998 | 197 | 1998 |
| Predicting extensively drug-resistant Mycobacterium tuberculosis phenotypes with genetic mutations TC Rodwell, F Valafar, J Douglas, L Qian, RS Garfein, A Chawla, J Torres, ... Journal of clinical microbiology 52 (3), 781-789, 2014 | 156 | 2014 |
| A gene wiki for community annotation of gene function JW Huss III, C Orozco, J Goodale, C Wu, S Batalov, TJ Vickers, F Valafar, ... PLoS biology 6 (7), e175, 2008 | 153 | 2008 |
| Empirical comparison of cross-platform normalization methods for gene expression data J Rudy, F Valafar BMC bioinformatics 12, 1-22, 2011 | 125 | 2011 |
| Systematic review of mutations in pyrazinamidase associated with pyrazinamide resistance in Mycobacterium tuberculosis clinical isolates SM Ramirez-Busby, F Valafar Antimicrobial agents and chemotherapy 59 (9), 5267-5277, 2015 | 123 | 2015 |
| Novel katG mutations causing isoniazid resistance in clinical M. tuberculosis isolates JN Torres, LV Paul, TC Rodwell, TC Victor, AM Amallraja, A Elghraoui, ... Emerging microbes & infections 4 (1), 1-9, 2015 | 120 | 2015 |
| The Gene Wiki: community intelligence applied to human gene annotation JW Huss III, P Lindenbaum, M Martone, D Roberts, A Pizarro, F Valafar, ... Nucleic acids research 38 (suppl_1), D633-D639, 2010 | 100 | 2010 |
| Detection of low-level mixed-population drug resistance in Mycobacterium tuberculosis using high fidelity amplicon sequencing RE Colman, JM Schupp, ND Hicks, DE Smith, JL Buchhagen, F Valafar, ... PloS one 10 (5), e0126626, 2015 | 97 | 2015 |
| Bioinformatic analyses of mammalian 5'-UTR sequence properties of mRNAs predicts alternative translation initiation sites JL Wegrzyn, TM Drudge, F Valafar, V Hook BMC bioinformatics 9, 1-16, 2008 | 72 | 2008 |
| Improving reverse vaccinology with a machine learning approach BN Bowman, PR McAdam, S Vivona, JX Zhang, T Luong, RK Belew, ... Vaccine 29 (45), 8156-8164, 2011 | 59 | 2011 |
| Performance comparison of three rapid tests for the diagnosis of drug-resistant tuberculosis A Catanzaro, TC Rodwell, DG Catanzaro, RS Garfein, RL Jackson, ... PloS one 10 (8), e0136861, 2015 | 50 | 2015 |
| Insect small nuclear RNA gene promoters evolve rapidly yet retain conserved features involved in determining promoter activity and RNA polymerase specificity G Hernandez Jr, F Valafar, WE Stumph Nucleic acids research 35 (1), 21-34, 2007 | 49 | 2007 |
| H2S Donors and Their Use in Medicinal Chemistry E Magli, E Perissutti, V Santagada, G Caliendo, A Corvino, G Esposito, ... Biomolecules 11 (12), 1899, 2021 | 40 | 2021 |
| Predicting the effectiveness of hydroxyurea in individual sickle cell anemia patients H Valafar, F Valafar, A Darvill, P Albersheim, A Kutlar, KF Woods, J Hardin Artificial intelligence in medicine 18 (2), 133-148, 2000 | 38 | 2000 |
| The Global Consortium for Drug-resistant Tuberculosis Diagnostics (GCDD): design of a multi-site, head-to-head study of three rapid tests to detect extensively drug-resistant … N Hillery, EJ Groessl, A Trollip, D Catanzaro, L Jackson, TC Rodwell, ... Trials 15, 1-13, 2014 | 37 | 2014 |
| A multinational analysis of mutations and heterogeneity in PZase, RpsA, and PanD associated with pyrazinamide resistance in M/XDR Mycobacterium tuberculosis SM Ramirez-Busby, TC Rodwell, L Fink, D Catanzaro, RL Jackson, ... Scientific reports 7 (1), 3790, 2017 | 36 | 2017 |
| Frequency and distribution of tuberculosis resistance-associated mutations between Mumbai, Moldova, and Eastern Cape SB Georghiou, M Seifert, D Catanzaro, RS Garfein, F Valafar, V Crudu, ... Antimicrobial agents and chemotherapy 60 (7), 3994-4004, 2016 | 32 | 2016 |
| Drivers and sites of diversity in the DNA adenine methylomes of 93 Mycobacterium tuberculosis complex clinical isolates SJ Modlin, D Conkle-Gutierrez, C Kim, SN Mitchell, C Morrissey, ... Elife 9, e58542, 2020 | 29 | 2020 |
| SMRT genome assembly corrects reference errors, resolving the genetic basis of virulence in Mycobacterium tuberculosis A Elghraoui, SJ Modlin, F Valafar BMC genomics 18, 1-14, 2017 | 28 | 2017 |
