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SDCSB
San Diego Center for Systems Biology - University of California, San Diego
Verified email at ucsd.edu
Title
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Cited by
Year
Genome-wide methylation profiles reveal quantitative views of human aging rates
G Hannum, J Guinney, L Zhao, LI Zhang, G Hughes, SV Sadda, B Klotzle, ...
Molecular cell 49 (2), 359-367, 2013
31392013
A travel guide to Cytoscape plugins
R Saito, ME Smoot, K Ono, J Ruscheinski, PL Wang, S Lotia, AR Pico, ...
Nature methods 9 (11), 1069-1076, 2012
14822012
Network-based stratification of tumor mutations
M Hofree, JP Shen, H Carter, A Gross, T Ideker
Nature methods 10 (11), 1108-1115, 2013
8712013
Differential network biology
T Ideker, NJ Krogan
Molecular systems biology 8 (1), 565, 2012
8582012
9p21 DNA variants associated with coronary artery disease impair interferon-γ signalling response
O Harismendy, D Notani, X Song, NG Rahim, B Tanasa, N Heintzman, ...
Nature 470 (7333), 264-268, 2011
7492011
Remodeling of the enhancer landscape during macrophage activation is coupled to enhancer transcription
MU Kaikkonen, NJ Spann, S Heinz, CE Romanoski, KA Allison, ...
Molecular cell 51 (3), 310-325, 2013
7012013
Differential activation and antagonistic function of HIF-α isoforms in macrophages are essential for NO homeostasis
N Takeda, EL O'Dea, A Doedens, J Kim, A Weidemann, C Stockmann, ...
Genes & development 24 (5), 491-501, 2010
6712010
Regulated accumulation of desmosterol integrates macrophage lipid metabolism and inflammatory responses
NJ Spann, LX Garmire, JG McDonald, DS Myers, SB Milne, N Shibata, ...
Cell 151 (1), 138-152, 2012
6042012
A single NFκB system for both canonical and non-canonical signaling
VFS Shih, R Tsui, A Caldwell, A Hoffmann
Cell research 21 (1), 86-102, 2011
5542011
Rewiring of genetic networks in response to DNA damage
S Bandyopadhyay, M Mehta, D Kuo, MK Sung, R Chuang, EJ Jaehnig, ...
Science 330 (6009), 1385-1389, 2010
5362010
Transcriptional burst frequency and burst size are equally modulated across the human genome
RD Dar, BS Razooky, A Singh, TV Trimeloni, JM McCollum, CD Cox, ...
Proceedings of the National Academy of Sciences 109 (43), 17454-17459, 2012
5122012
A sensing array of radically coupled genetic ‘biopixels’
A Prindle, P Samayoa, I Razinkov, T Danino, LS Tsimring, J Hasty
Nature 481 (7379), 39-44, 2012
4912012
Identification of small molecule activators of cryptochrome
T Hirota, JW Lee, PC St. John, M Sawa, K Iwaisako, T Noguchi, ...
Science 337 (6098), 1094-1097, 2012
4832012
ER stress activates NF-κB by integrating functions of basal IKK activity, IRE1 and PERK
AB Tam, EL Mercado, A Hoffmann, M Niwa
PloS one 7 (10), e45078, 2012
3652012
Effect of natural genetic variation on enhancer selection and function
S Heinz, CE Romanoski, C Benner, KA Allison, MU Kaikkonen, ...
Nature 503 (7477), 487-492, 2013
3492013
Non‐autophagic roles of autophagy‐related proteins
S Subramani, V Malhotra
EMBO reports 14 (2), 143-151, 2013
2732013
A human MAP kinase interactome
S Bandyopadhyay, C Chiang, J Srivastava, M Gersten, S White, R Bell, ...
Nature methods 7 (10), 801-805, 2010
2402010
Entrainment of a population of synthetic genetic oscillators
O Mondragón-Palomino, T Danino, J Selimkhanov, L Tsimring, J Hasty
Science 333 (6047), 1315-1319, 2011
2392011
Hierarchical modularity and the evolution of genetic interactomes across species
CJ Ryan, A Roguev, K Patrick, J Xu, H Jahari, Z Tong, P Beltrao, M Shales, ...
Molecular cell 46 (5), 691-704, 2012
2342012
Queueing up for enzymatic processing: correlated signaling through coupled degradation
NA Cookson, WH Mather, T Danino, O Mondragón‐Palomino, ...
Molecular systems biology 7 (1), 561, 2011
2192011
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Articles 1–20