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Alexander Nederbragt
Alexander Nederbragt
University of Oslo, Dept. of Biosciences/Centre for Ecoloigcal and Evolutionary Synthesis and
Verifisert e-postadresse på bio.uio.no - Startside
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The Atlantic salmon genome provides insights into rediploidization
S Lien, BF Koop, SR Sandve, JR Miller, MP Kent, T Nome, TR Hvidsten, ...
Nature 533 (7602), 200-205, 2016
10512016
The genome sequence of Atlantic cod reveals a unique immune system
B Star, AJ Nederbragt, S Jentoft, U Grimholt, M Malmstrøm, TF Gregers, ...
Nature 477 (7363), 207-210, 2011
8602011
Good enough practices in scientific computing
G Wilson, J Bryan, K Cranston, J Kitzes, L Nederbragt, TK Teal
PLoS computational biology 13 (6), e1005510, 2017
5072017
The khmer software package: enabling efficient nucleotide sequence analysis
MR Crusoe, HF Alameldin, S Awad, E Boucher, A Caldwell, R Cartwright, ...
F1000Research 4, 2015
3742015
Assessing diversity of the female urine microbiota by high throughput sequencing of 16S rDNA amplicons
H Siddiqui, A Nederbragt, K Lagesen, S Jeansson, K Jakobsen
BMC microbiology 11 (1), 244, 2011
3612011
Evolution of the immune system influences speciation rates in teleost fishes
M Malmstrøm, M Matschiner, OK Tørresen, B Star, LG Snipen, TF Hansen, ...
Nature Genetics 48 (10), 1204-1210, 2016
2382016
Alterations of microbiota in urine from women with interstitial cystitis
H Siddiqui, K Lagesen, AJ Nederbragt, SL Jeansson, KS Jakobsen
BMC Microbiology 12 (1), 205, 2012
2262012
Environmental microbiology through the lens of high-throughput DNA sequencing: synopsis of current platforms and bioinformatics approaches
R Logares, THA Haverkamp, S Kumar, A Lanzén, AJ Nederbragt, ...
Journal of microbiological methods 91 (1), 106-113, 2012
1892012
Improved metagenome assemblies and taxonomic binning using long-read circular consensus sequence data
JA Frank, Y Pan, A Tooming-Klunderud, VGH Eijsink, AC McHardy, ...
Scientific reports 6 (1), 25373, 2016
1762016
An improved genome assembly uncovers prolific tandem repeats in Atlantic cod
OK Tørresen, B Star, S Jentoft, WB Reinar, H Grove, JR Miller, BP Walenz, ...
BMC Genomics 18 (1), 95, 2017
1652017
Expression of Patella vulgata orthologs of engrailed and dpp-BMP2/4 in adjacent domains during molluscan shell development suggests a conserved compartment boundary mechanism
AJ Nederbragt, AE van Loon, WJAG Dictus
Developmental biology 246 (2), 341-355, 2002
1572002
The genomic mosaicism of hybrid speciation
TO Elgvin, CN Trier, OK Tørresen, IJ Hagen, S Lien, AJ Nederbragt, ...
Science Advances 3 (6), e1602996, 2017
1512017
A novel totivirus and piscine reovirus (PRV) in Atlantic salmon (Salmo salar) with cardiomyopathy syndrome (CMS)
M Løvoll, J Wiik-Nielsen, S Grove, CR Wiik-Nielsen, AB Kristoffersen, ...
Virology Journal 7 (1), 1-7, 2010
1492010
A genome-wide analysis of nonribosomal peptide synthetase gene clusters and their peptides in a Planktothrix rubescens strain
T Rounge, T Rohrlack, A Nederbragt, T Kristensen, K Jakobsen
BMC genomics 10 (1), 396, 2009
1212009
Large-scale sequence analyses of Atlantic cod
SD Johansen, DH Coucheron, M Andreassen, BO Karlsen, T Furmanek, ...
New biotechnology 25 (5), 263-271, 2009
882009
Genome Evolution of a Tertiary Dinoflagellate Plastid
TM Gabrielsen, MA Minge, M Espelund, A Tooming-Klunderud, V Patil, ...
PloS one 6 (4), e19132, 2011
842011
Hybrid speciation through sorting of parental incompatibilities in Italian sparrows
JS Hermansen, F Haas, CN Trier, RI Bailey, AJ Nederbragt, A Marzal, ...
Molecular ecology 23 (23), 5831-5842, 2014
832014
A high-quality assembly of the nine-spined stickleback (Pungitius pungitius) genome
S Varadharajan, P Rastas, A Löytynoja, M Matschiner, FCF Calboli, ...
Genome Biology and Evolution, 2019
792019
Complete genome sequence of the commensal Enterococcus faecalis 62, isolated from a healthy Norwegian infant
DA Brede, LG Snipen, DW Ussery, AJ Nederbragt, IF Nes
Journal of bacteriology 193 (9), 2377-2378, 2011
702011
On the middle ground between open source and commercial software-the case of the Newbler program
AJ Nederbragt
Genome biology 15 (4), 1-2, 2014
682014
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Artikler 1–20