Optimization of metabolomic data processing using NOREVA J Fu, Y Zhang, Y Wang, H Zhang, J Liu, J Tang, Q Yang, H Sun, W Qiu, ... Nature protocols 17 (1), 129-151, 2022 | 132 | 2022 |
SYNBIP: synthetic binding proteins for research, diagnosis and therapy X Wang, F Li, W Qiu, B Xu, Y Li, X Lian, H Yu, Z Zhang, J Wang, Z Li, ... Nucleic acids research 50 (D1), D560-D570, 2022 | 53 | 2022 |
DrugMAP: molecular atlas and pharma-information of all drugs F Li, J Yin, M Lu, M Mou, Z Li, Z Zeng, Y Tan, S Wang, X Chu, H Dai, ... Nucleic acids research 51 (D1), D1288-D1299, 2023 | 48 | 2023 |
PFmulDL: a novel strategy enabling multi-class and multi-label protein function annotation by integrating diverse deep learning methods W Xia, L Zheng, J Fang, F Li, Y Zhou, Z Zeng, B Zhang, Z Li, H Li, F Zhu Computers in Biology and Medicine 145, 105465, 2022 | 48 | 2022 |
ConSIG: consistent discovery of molecular signature from OMIC data F Li, J Yin, M Lu, Q Yang, Z Zeng, B Zhang, Z Li, Y Qiu, H Dai, Y Chen, ... Briefings in Bioinformatics 23 (4), bbac253, 2022 | 40 | 2022 |
NPCDR: natural product-based drug combination and its disease-specific molecular regulation X Sun, Y Zhang, Y Zhou, X Lian, L Yan, T Pan, T Jin, H Xie, Z Liang, ... Nucleic acids research 50 (D1), D1324-D1333, 2022 | 30 | 2022 |
ncRNAInter: a novel strategy based on graph neural network to discover interactions between lncRNA and miRNA H Zhang, Y Wang, Z Pan, X Sun, M Mou, B Zhang, Z Li, H Li, F Zhu Briefings in bioinformatics 23 (6), bbac411, 2022 | 24 | 2022 |
KG-MTT-BERT: knowledge graph enhanced BERT for multi-type medical text classification Y He, C Wang, S Zhang, N Li, Z Li, Z Zeng arXiv preprint arXiv:2210.03970, 2022 | 11 | 2022 |
REGLIV: molecular regulation data of diverse living systems facilitating current multiomics research S Zhang, X Sun, M Mou, K Amahong, H Sun, W Zhang, S Shi, Z Li, J Gao, ... Computers in Biology and Medicine 148, 105825, 2022 | 11 | 2022 |
A task-specific encoding algorithm for RNAs and RNA-associated interactions based on convolutional autoencoder Y Wang, Z Pan, M Mou, W Xia, H Zhang, H Zhang, J Liu, L Zheng, Y Luo, ... Nucleic Acids Research 51 (21), e110-e110, 2023 | 10 | 2023 |
AnnoPRO: a strategy for protein function annotation based on multi-scale protein representation and a hybrid deep learning of dual-path encoding L Zheng, S Shi, M Lu, P Fang, Z Pan, H Zhang, Z Zhou, H Zhang, M Mou, ... Genome Biology 25 (1), 41, 2024 | 9 | 2024 |
Biological activities of drug inactive ingredients C Zhang, M Mou, Y Zhou, W Zhang, X Lian, S Shi, M Lu, H Sun, F Li, ... Briefings in Bioinformatics 23 (5), bbac160, 2022 | 9 | 2022 |
Artificial intelligence redefines RNA virus discovery M Shi, X Hou, Y He, P Fang, SQ Mei, Z Xu, WC Wu, J Tian, S Zhang, ... | 8 | 2023 |
Feature, Function, and Information of Drug Transporter–Related Databases J Yin, F Li, Z Li, L Yu, F Zhu, S Zeng Drug Metabolism and Disposition 50 (1), 76-85, 2022 | 3 | 2022 |
AnnoPRO: an innovative strategy for protein function annotation based on image-like protein representation and multimodal deep learning L Zheng, S Shi, P Fang, H Zhang, Z Pan, S Huang, W Xia, H Li, Z Zeng, ... bioRxiv, 2023.05. 13.540619, 2023 | 1 | 2023 |
Clinical Coding Based on Knowledge Enhanced Language Model and Attention Pooling Y He, W Li, S Zhang, Z Li, Z Ding, Z Zeng China Health Information Processing Conference, 185-205, 2022 | | 2022 |