Aziz Khan
Aziz Khan
Stanford Cancer Institute, Stanford University
Verified email at stanford.edu - Homepage
Title
Cited by
Cited by
Year
JASPAR 2018: update of the open-access database of transcription factor binding profiles and its web framework
A Khan, O Fornes, A Stigliani, M Gheorghe, JA Castro-Mondragon, ...
Nucleic acids research 46 (D1), D260-D266, 2018
8272018
Bioconda: sustainable and comprehensive software distribution for the life sciences
B Grüning, R Dale, A Sjödin, BA Chapman, J Rowe, CH Tomkins-Tinch, ...
Nature Methods 15, 475–476, 2018
2692018
dbSUPER: a database of super-enhancers in mouse and human genome
A Khan, X Zhang
Nucleic acids research 44 (D1), D164-D171, 2016
1882016
JASPAR 2020: update of the open-access database of transcription factor binding profiles
O Fornes, JA Castro-Mondragon, A Khan, R van der Lee, X Zhang, ...
Nucleic acids research, 2019
1622019
Intervene: a tool for intersection and visualization of multiple gene or genomic region sets
A Khan, A Mathelier
BMC bioinformatics 18 (1), 287, 2017
852017
Adaptive watermark strength selection using particle swarm optimization
M Ishtiaq, B Sikandar, MA Jaffar, A Khan
ICIC Express Letters 4 (5), 1-6, 2010
342010
A map of direct TF–DNA interactions in the human genome
M Gheorghe, GK Sandve, A Khan, J Chèneby, B Ballester, A Mathelier
Nucleic acids research 47 (4), e21-e21, 2019
222019
The Human Tumor Atlas Network: charting tumor transitions across space and time at single-cell resolution
O Rozenblatt-Rosen, A Regev, P Oberdoerffer, T Nawy, A Hupalowska, ...
Cell 181 (2), 236-249, 2020
172020
Super-enhancers are transcriptionally more active and cell type-specific than stretch enhancers
A Khan, A Mathelier, X Zhang
Epigenetics 13 (9), 910-922, 2018
172018
Modeling RNA-binding protein specificity in vivo by precisely registering protein-RNA crosslink sites
H Feng, S Bao, MA Rahman, SM Weyn-Vanhentenryck, A Khan, J Wong, ...
Molecular cell 74 (6), 1189-1204. e6, 2019
162019
High OGT activity is essential for MYC-driven proliferation of prostate cancer cells
HM Itkonen, A Urbanucci, SES Martin, A Khan, A Mathelier, B Thiede, ...
Theranostics 9 (8), 2183, 2019
112019
Put science first and formatting later
A Khan, A Montenegro‐Montero, A Mathelier
EMBO reports 19 (5), e45731, 2018
72018
JASPAR RESTful API: accessing JASPAR data from any programming language
A Khan, A Mathelier
Bioinformatics 34 (9), 1612-1614, 2018
72018
Evaluating features of scientific conferences: A call for improvements
S Sarabipour, B Schwessinger, FN Mumoki, AD Mwakilili, A Khan, ...
BioRxiv, 2020
62020
A Hybrid Feature Selection Approach by Combining miD and miQ
M Ishtiaq, A Khan, MA Jaffar, HJ Kim
한국정보통신설비학회 학술대회, 367-373, 2011
3*2011
Integrative modeling reveals key chromatin and sequence signatures predicting super-enhancers
A Khan, X Zhang
Scientific reports 9 (1), 1-15, 2019
12019
Making genome browsers portable and personal
A Khan, X Zhang
Genome biology 19 (1), 1-3, 2018
12018
Intervene: a tool for intersection and visualization of multiple genomic region and gene sets
A Khan, A Mathelier
F1000Research 7, 2018
2018
Towards a format-free submission policy: Let's put science first
A Khan, A Mathelier
F1000Research 7, 2018
2018
JASPAR: an open-access database of transcription factor binding profiles
A Khan, O Fornes, A Stigliani, M Gheorghe, JA Castro-Mondragon, ...
F1000Research 7, 2018
2018
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Articles 1–20