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Scott T. Kelley
Scott T. Kelley
Professor of Biology, San Diego State University
Verifisert e-postadresse på mail.sdsu.edu
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QIIME allows analysis of high-throughput community sequencing data
JG Caporaso, J Kuczynski, J Stombaugh, K Bittinger, FD Bushman, ...
Nature methods 7 (5), 335-336, 2010
345402010
Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2
E Bolyen, JR Rideout, MR Dillon, NA Bokulich, CC Abnet, GA Al-Ghalith, ...
Nature biotechnology 37 (8), 852-857, 2019
129642019
Structure, function and diversity of the healthy human microbiome
nature 486 (7402), 207-214, 2012
99922012
Quantitative and qualitative β diversity measures lead to different insights into factors that structure microbial communities
CA Lozupone, M Hamady, ST Kelley, R Knight
Applied and environmental microbiology 73 (5), 1576-1585, 2007
25202007
A framework for human microbiome research
Nature 486 (7402), 215-221, 2012
2357*2012
Isolation by distance, web service
JL Jensen, AJ Bohonak, ST Kelley
BMC genetics 6, 1-6, 2005
17272005
Bayesian community-wide culture-independent microbial source tracking
D Knights, J Kuczynski, ES Charlson, J Zaneveld, MC Mozer, RG Collman, ...
Nature methods 8 (9), 761-763, 2011
14312011
Metabolic reconstruction for metagenomic data and its application to the human microbiome
S Abubucker, N Segata, J Goll, AM Schubert, J Izard, BL Cantarel, ...
PLoS computational biology 8 (6), e1002358, 2012
11552012
The marine viromes of four oceanic regions
FE Angly, B Felts, M Breitbart, P Salamon, RA Edwards, C Carlson, ...
PLoS biology 4 (11), e368, 2006
11212006
QIIME 2: Reproducible, interactive, scalable, and extensible microbiome data science
E Bolyen, JR Rideout, MR Dillon, NA Bokulich, C Abnet, GA Al-Ghalith, ...
PeerJ Preprints, 2018
9202018
Minimum information about a marker gene sequence (MIMARKS) and minimum information about any (x) sequence (MIxS) specifications
P Yilmaz, R Kottmann, D Field, R Knight, JR Cole, L Amaral-Zettler, ...
Nature biotechnology 29 (5), 415-420, 2011
7072011
American gut: an open platform for citizen science microbiome research
D McDonald, E Hyde, JW Debelius, JT Morton, A Gonzalez, G Ackermann, ...
Msystems 3 (3), 10.1128/msystems. 00031-18, 2018
6472018
IS SPECIALIZATION A DEAD END? THE PHYLOGENY OF HOST USE IN DENDROCTONUS BARK BEETLES (SCOLYTIDAE)
ST Kelley, BD Farrell
Evolution 52 (6), 1731-1743, 1998
3941998
Viral diversity and dynamics in an infant gut
M Breitbart, M Haynes, S Kelley, F Angly, RA Edwards, B Felts, ...
Research in microbiology 159 (5), 367-373, 2008
3862008
Diversity and population structure of a near–shore marine–sediment viral community
M Breitbart, B Felts, S Kelley, JM Mahaffy, J Nulton, P Salamon, F Rohwer
Proceedings of the Royal Society of London. Series B: Biological Sciences …, 2004
3772004
Phylogenetic classification of short environmental DNA fragments
L Krause, NN Diaz, A Goesmann, S Kelley, TW Nattkemper, F Rohwer, ...
Nucleic acids research 36 (7), 2230-2239, 2008
3442008
The genetic core of the universal ancestor
JK Harris, ST Kelley, GB Spiegelman, NR Pace
Genome research 13 (3), 407-412, 2003
3212003
Rapid development of multiple nuclear loci for phylogenetic analysis using genomic resources: an example from squamate reptiles
TM Townsend, RE Alegre, ST Kelley, JJ Wiens, TW Reeder
Molecular phylogenetics and evolution 47 (1), 129-142, 2008
3012008
Murine noroviruses comprising a single genogroup exhibit biological diversity despite limited sequence divergence
LB Thackray, CE Wobus, KA Chachu, B Liu, ER Alegre, KS Henderson, ...
Journal of virology 81 (19), 10460-10473, 2007
2962007
Molecular identification of potential pathogens in water and air of a hospital therapy pool
LT Angenent, ST Kelley, AS Amand, NR Pace, MT Hernandez
Proceedings of the National Academy of Sciences 102 (13), 4860-4865, 2005
2952005
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Artikler 1–20