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Akio Kitao (北尾 彰朗)
Akio Kitao (北尾 彰朗)
Verified email at bio.titech.ac.jp - Homepage
Title
Cited by
Cited by
Year
Multidimensional replica-exchange method for free-energy calculations
Y Sugita, A Kitao, Y Okamoto
The Journal of chemical physics 113 (15), 6042-6051, 2000
10032000
Investigating protein dynamics in collective coordinate space
A Kitao, N Go
Current opinion in structural biology 9 (2), 164-169, 1999
5701999
The effects of solvent on the conformation and the collective motions of protein: normal mode analysis and molecular dynamics simulations of melittin in water and in vacuum
A Kitao, F Hirata, N Gō
Chemical physics 158 (2-3), 447-472, 1991
4831991
Normal mode analysis: theory and applications to biological and chemical systems
Q Cui, I Bahar
CRC press, 2005
4302005
Model‐free methods of analyzing domain motions in proteins from simulation: a comparison of normal mode analysis and molecular dynamics simulation of lysozyme
S Hayward, A Kitao, HJC Berendsen
Proteins: Structure, Function, and Bioinformatics 27 (3), 425-437, 1997
3351997
Energy landscape of a native protein: Jumping‐among‐minima model
A Kitao, S Hayward, N Go
Proteins: Structure, Function, and Bioinformatics 33 (4), 496-517, 1998
3061998
Structure of the bacterial flagellar hook and implication for the molecular universal joint mechanism
FA Samatey, H Matsunami, K Imada, S Nagashima, TR Shaikh, ...
Nature 431 (7012), 1062-1068, 2004
2492004
Effect of solvent on collective motions in globular protein
S Hayward, A Kitao, F Hirata, N Gō
Journal of molecular biology 234 (4), 1207-1217, 1993
2371993
Harmonicity and anharmonicity in protein dynamics: a normal mode analysis and principal component analysis
S Hayward, A Kitao, N Gō
Proteins: Structure, Function, and Bioinformatics 23 (2), 177-186, 1995
1831995
Harmonic and anharmonic aspects in the dynamics of BPTI: a normal mode analysis and principal component analysis
S Hayward, A Kitao, N Gō
Protein Science 3 (6), 936-943, 1994
1651994
Parallel cascade selection molecular dynamics (PaCS-MD) to generate conformational transition pathway
R Harada, A Kitao
The Journal of chemical physics 139 (3), 2013
1532013
Principal component analysis of native ensembles of biomolecular structures (PCA_NEST): insights into functional dynamics
LW Yang, E Eyal, I Bahar, A Kitao
Bioinformatics 25 (5), 606-614, 2009
1532009
Delineating the conformational landscape of the adenosine A2A receptor during G protein coupling
SK Huang, A Pandey, DP Tran, NL Villanueva, A Kitao, RK Sunahara, ...
Cell 184 (7), 1884-1894. e14, 2021
1152021
TRPV4 channel activity is modulated by direct interaction of the ankyrin domain to PI(4,5)P2
N Takahashi, S Hamada-Nakahara, Y Itoh, K Takemura, A Shimada, ...
Nature communications 5 (1), 4994, 2014
1122014
Structure of the cytoplasmic domain of FlhA and implication for flagellar type III protein export
Y Saijo‐Hamano, K Imada, T Minamino, M Kihara, M Shimada, A Kitao, ...
Molecular microbiology 76 (1), 260-268, 2010
982010
Water model tuning for improved reproduction of rotational diffusion and NMR spectral density
K Takemura, A Kitao
The Journal of Physical Chemistry B 116 (22), 6279-6287, 2012
942012
Picosecond fluctuating protein energy landscape mapped by pressure–temperature molecular dynamics simulation
L Meinhold, JC Smith, A Kitao, AH Zewail
Proceedings of the National Academy of Sciences 104 (44), 17261-17265, 2007
922007
Switch interactions control energy frustration and multiple flagellar filament structures
A Kitao, K Yonekura, S Maki-Yonekura, FA Samatey, K Imada, K Namba, ...
Proceedings of the National Academy of Sciences 103 (13), 4894-4899, 2006
742006
Hydration affects both harmonic and anharmonic nature of protein dynamics
H Nakagawa, Y Joti, A Kitao, M Kataoka
Biophysical journal 95 (6), 2916-2923, 2008
712008
Eritoran inhibits S100A8-mediated TLR4/MD-2 activation and tumor growth by changing the immune microenvironment
A Deguchi, T Tomita, U Ohto, K Takemura, A Kitao, S Akashi-Takamura, ...
Oncogene 35 (11), 1445-1456, 2016
692016
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