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Tiziana Castrignanò
Tiziana Castrignanò
Researcher, University of Tuscia, Department of Ecological and Biological Sciences, Viterbo, Italy.
Verified email at unitus.it
Title
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Cited by
Year
The PMDB protein model database
T Castrignano, PDO De Meo, D Cozzetto, IG Talamo, A Tramontano
Nucleic acids research 34 (suppl_1), D306-D309, 2006
3542006
Bioinformatics approaches for genomics and post genomics applications of next-generation sequencing
DS Horner, G Pavesi, T Castrignano, PDO De Meo, S Liuni, M Sammeth, ...
Briefings in bioinformatics 11 (2), 181-197, 2010
2502010
Developmental factor IRF6 exhibits tumor suppressor activity in squamous cell carcinomas
E Botti, G Spallone, F Moretti, B Marinari, V Pinetti, S Galanti, ...
Proceedings of the National Academy of Sciences 108 (33), 13710-13715, 2011
1622011
SpliceAid-F: a database of human splicing factors and their RNA-binding sites
GP Matteo Giulietti, Francesco Piva, Mattia D’Antonio, Paolo D’Onorio De Meo ...
Nucleic Acids Res 41 ((D1): D125-D131), 2013
1362013
Genome-wide mapping of 8-oxo-7, 8-dihydro-2′-deoxyguanosine reveals accumulation of oxidatively-generated damage at DNA replication origins within transcribed long genes of …
S Amente, G Di Palo, G Scala, T Castrignanò, F Gorini, S Cocozza, ...
Nucleic acids research 47 (1), 221-236, 2019
922019
REDIportal: millions of novel A-to-I RNA editing events from thousands of RNAseq experiments
L Mansi, MA Tangaro, C Lo Giudice, T Flati, E Kopel, AA Schaffer, ...
Nucleic acids research 49 (D1), D1012-D1019, 2021
882021
RAP: RNA-Seq Analysis Pipeline, a new cloud-based NGS web application
M D'Antonio, P D'Onorio De Meo, M Pallocca, E Picardi, AM D'Erchia, ...
BMC genomics 16, 1-11, 2015
842015
Che‐1‐induced inhibition of mTOR pathway enables stress‐induced autophagy
A Desantis, T Bruno, V Catena, F De Nicola, F Goeman, S Iezzi, C Sorino, ...
The EMBO Journal 34 (9), 1214-1230, 2015
752015
Novel cDNAs encoding salivary proteins from the malaria vector Anopheles gambiae
A Lanfrancotti, F Lombardo, F Santolamazza, M Veneri, T Castrignanò, ...
FEBS letters 517 (1-3), 67-71, 2002
662002
MitoZoa: a curated mitochondrial genome database of metazoans for comparative genomics studies
R Lupi, PDO de Meo, E Picardi, M D’Antonio, D Paoletti, T Castrignanò, ...
Mitochondrion 10 (2), 192-199, 2010
622010
ASPicDB: a database resource for alternative splicing analysis
T Castrignanò, M D’Antonio, A Anselmo, D Carrabino, A D’Onorio De Meo, ...
Bioinformatics 24 (10), 1300-1304, 2008
602008
WEP: a high-performance analysis pipeline for whole-exome data
M D'Antonio, P D'Onorio De Meo, D Paoletti, B Elmi, M Pallocca, N Sanna, ...
BMC bioinformatics 14, 1-11, 2013
592013
MitoZoa 2.0: a database resource and search tools for comparative and evolutionary analyses of mitochondrial genomes in Metazoa
P D'Onorio de Meo, M D'Antonio, F Griggio, R Lupi, M Borsani, G Pavesi, ...
Nucleic acids research 40 (D1), D1168-D1172, 2012
522012
VDR primary targets by genome-wide transcriptional profiling
F Goeman, F De Nicola, PDO De Meo, M Pallocca, B Elmi, T Castrignanò, ...
The Journal of steroid biochemistry and molecular biology 143, 348-356, 2014
512014
ASPicDB: a database of annotated transcript and protein variants generated by alternative splicing
PL Martelli, M D’Antonio, P Bonizzoni, T Castrignano, AM D’Erchia, ...
Nucleic acids research 39 (suppl_1), D80-D85, 2010
492010
A gene expression atlas for different kinds of stress in the mouse brain
T Flati, S Gioiosa, G Chillemi, A Mele, A Oliverio, C Mannironi, A Rinaldi, ...
Scientific Data 7 (1), 437, 2020
432020
CSTminer: a web tool for the identification of coding and noncoding conserved sequence tags through cross-species genome comparison
T Castrignano, A Canali, G Grillo, S Liuni, F Mignone, G Pesole
Nucleic Acids Research 32 (suppl_2), W624-W627, 2004
432004
ASPIC: a web resource for alternative splicing prediction and transcript isoforms characterization
T Castrignano, R Rizzi, IG Talamo, PDO De Meo, A Anselmo, P Bonizzoni, ...
Nucleic Acids Research 34 (suppl_2), W440-W443, 2006
412006
HPC-REDItools: a novel HPC-aware tool for improved large scale RNA-editing analysis
CT Flati T, Gioiosa S, Spallanzani N, Tagliaferri I, Diroma MA, Pesole G ...
BMC Bioinformatics 21 (10), 1-12, 2020
392020
Molecular dynamics simulation of the RNA complex of a double-stranded RNA-binding domain reveals dynamic features of the intermolecular interface and its hydration
T Castrignanò, G Chillemi, G Varani, A Desideri
Biophysical journal 83 (6), 3542-3552, 2002
392002
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Articles 1–20