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Joseph D Barry
Joseph D Barry
Associate Director, Data Sciences, Alnylam Pharmaceuticals
Verifisert e-postadresse på alnylam.com
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Data-analysis strategies for image-based cell profiling
JC Caicedo, S Cooper, F Heigwer, S Warchal, P Qiu, C Molnar, ...
Nature methods 14 (9), 849-863, 2017
6402017
Directional tissue migration through a self-generated chemokine gradient
E Donà, JD Barry, G Valentin, C Quirin, A Khmelinskii, A Kunze, S Durdu, ...
Nature 503 (7475), 285-289, 2013
4002013
Tandem fluorescent protein timers for in vivo analysis of protein dynamics
A Khmelinskii, PJ Keller, A Bartosik, M Meurer, JD Barry, BR Mardin, ...
Nature biotechnology 30 (7), 708-714, 2012
3072012
Protein quality control at the inner nuclear membrane
A Khmelinskii, E Blaszczak, M Pantazopoulou, B Fischer, DJ Omnus, ...
Nature 516 (7531), 410-413, 2014
2132014
An optogenetic method to modulate cell contractility during tissue morphogenesis
G Guglielmi, JD Barry, W Huber, S De Renzis
Developmental cell 35 (5), 646-660, 2015
2002015
Data analysis strategies in medical imaging
C Parmar, JD Barry, A Hosny, J Quackenbush, HJWL Aerts
Clinical cancer research 24 (15), 3492-3499, 2018
1582018
Fundamental physical cellular constraints drive self‐organization of tissues
D Sánchez‐Gutiérrez, M Tozluoglu, JD Barry, A Pascual, Y Mao, ...
The EMBO journal 35 (1), 77-88, 2016
1302016
Double power laws in income and wealth distributions
R Coelho, P Richmond, J Barry, S Hutzler
Physica A: Statistical Mechanics and its Applications 387 (15), 3847-3851, 2008
552008
Timer-based proteomic profiling of the ubiquitin-proteasome system reveals a substrate receptor of the GID ubiquitin ligase
KYE Kong, B Fischer, M Meurer, I Kats, Z Li, F Rühle, JD Barry, ...
Molecular cell 81 (11), 2460-2476. e11, 2021
412021
Control of tissue morphology by Fasciclin III-mediated intercellular adhesion
RE Wells*, JD Barry*(joint-first), SJ Warrington, S Cuhlmann, P Evans, ...
Development 140 (18), 3858-3868, 2013
392013
From bench to bedside: Improving the clinical safety of GalNAc–siRNA conjugates using seed-pairing destabilization
MK Schlegel, MM Janas, Y Jiang, JD Barry, W Davis, S Agarwal, ...
Nucleic acids research 50 (12), 6656-6670, 2022
342022
Nα-terminal acetylation of proteins by NatA and NatB serves distinct physiological roles in Saccharomyces cerevisiae
UA Friedrich, M Zedan, B Hessling, K Fenzl, L Gillet, J Barry, M Knop, ...
Cell reports 34 (5), 2021
322021
The continuum theory of shear localization in two-dimensional foam
D Weaire, JD Barry, S Hutzler
Journal of Physics: Condensed Matter 22 (19), 193101, 2010
292010
Biggest challenges in bioinformatics
JC Fuller, P Khoueiry, H Dinkel, K Forslund, A Stamatakis, J Barry, A Budd, ...
EMBO reports 14 (4), 302-304, 2013
232013
Shear localisation with 2D viscous froth and its relation to the continuum model
JD Barry, D Weaire, S Hutzler
Rheologica acta 49, 687-698, 2010
222010
TimerQuant: a modelling approach to tandem fluorescent timer design and data interpretation for measuring protein turnover in embryos
JD Barry, E Donà, D Gilmour, W Huber
Development 143 (1), 174-179, 2016
202016
Ordered polyhedral foams in tubes with circular, triangular and square cross-section
ST Tobin, JD Barry, AJ Meagher, B Bulfin, CE O’Rathaille, S Hutzler
Colloids and Surfaces A: Physicochemical and Engineering Aspects 382 (1-3 …, 2011
202011
Ordered cylindrical foam structures with internal bubbles
M Saadatfar, J Barry, D Weaire, S Hutzler
Philosophical magazine letters 88 (9-10), 661-668, 2008
182008
Histopathological image QTL discovery of immune infiltration variants
JD Barry, M Fagny, JN Paulson, HJWL Aerts, J Platig, J Quackenbush
iScience 5, 80-89, 2018
16*2018
Overcoming GNA/RNA base-pairing limitations using isonucleotides improves the pharmacodynamic activity of ESC+ GalNAc-siRNAs
MK Schlegel, S Matsuda, CR Brown, JM Harp, JD Barry, D Berman, ...
Nucleic acids research 49 (19), 10851-10867, 2021
152021
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Artikler 1–20