| CHEXVIS: a tool for molecular channel extraction and visualization TB Masood, S Sandhya, N Chandra, V Natarajan BMC bioinformatics 16, 1-19, 2015 | 87 | 2015 |
| De-DUFing the DUFs: Deciphering distant evolutionary relationships of Domains of Unknown Function using sensitive homology detection methods R Mudgal, S Sandhya, N Chandra, N Srinivasan Biology Direct 10, 1-23, 2015 | 54 | 2015 |
| Length variations amongst protein domain superfamilies and consequences on structure and function S Sandhya, SS Rani, B Pankaj, MK Govind, B Offmann, N Srinivasan, ... PLoS One 4 (3), e4981, 2009 | 44 | 2009 |
| Structural Annotation of Mycobacterium tuberculosis Proteome P Anand, S Sankaran, S Mukherjee, K Yeturu, R Laskowski, A Bhardwaj, ... PloS one 6 (10), e27044, 2011 | 43 | 2011 |
| Assessment of a rigorous transitive profile based search method to detect remotely similar proteins S Sandhya, S Chakrabarti, KR Abhinandan, R Sowdhamini, N Srinivasan Journal of Biomolecular Structure and Dynamics 23 (3), 283-298, 2005 | 34 | 2005 |
| Bioinformatic and mutational studies of related toxin–antitoxin pairs in Mycobacterium tuberculosis predict and identify key functional residues H Tandon, A Sharma, S Wadhwa, R Varadarajan, R Singh, N Srinivasan, ... Journal of Biological Chemistry 294 (23), 9048-9063, 2019 | 27 | 2019 |
| Domain architecture of BAF250a reveals the ARID and ARM-repeat domains with implication in function and assembly of the BAF remodeling complex S Sandhya, A Maulik, M Giri, M Singh PLoS One 13 (10), e0205267, 2018 | 26 | 2018 |
| Mapping post-translational modifications of mammalian testicular specific histone variant TH2B in tetraploid and haploid germ cells and their implications on the dynamics of … SK Pentakota, S Sandhya, A P. Sikarwar, N Chandra, ... Journal of Proteome Research 13 (12), 5603-5617, 2014 | 26 | 2014 |
| CUSP: an algorithm to distinguish structurally conserved and unconserved regions in protein domain alignments and its application in the study of large length variations S Sandhya, B Pankaj, MK Govind, B Offmann, N Srinivasan, ... BMC Structural Biology 8, 1-14, 2008 | 25 | 2008 |
| Cascade PSI-BLAST web server: a remote homology search tool for relating protein domains R Bhadra, S Sandhya, KR Abhinandan, S Chakrabarti, R Sowdhamini, ... Nucleic Acids Research 34 (suppl_2), W143-W146, 2006 | 20 | 2006 |
| Mycobacterium tuberculosis Rv0366c-Rv0367c encodes a non-canonical PezAT-like toxin-antitoxin pair H Tandon, A Sharma, S Sandhya, N Srinivasan, R Singh Scientific Reports 9 (1), 1163, 2019 | 18 | 2019 |
| Filling-in void and sparse regions in protein sequence space by protein-like artificial sequences enables remarkable enhancement in remote homology detection capability R Mudgal, R Sowdhamini, N Chandra, N Srinivasan, S Sandhya Journal of Molecular Biology 426 (4), 962-979, 2014 | 14 | 2014 |
| Improved detection of remote homologues using cascade PSI-BLAST: influence of neighbouring protein families on sequence coverage S Kaushik, E Mutt, A Chellappan, S Sankaran, N Srinivasan, ... PLoS One 8 (2), e56449, 2013 | 14 | 2013 |
| Effective detection of remote homologues by searching in sequence dataset of a protein domain fold S Sandhya, S Kishore, R Sowdhamini, N Srinivasan FEBS letters 552 (2-3), 225-230, 2003 | 14 | 2003 |
| NrichD database: sequence databases enriched with computationally designed protein-like sequences aid in remote homology detection R Mudgal, S Sandhya, G Kumar, R Sowdhamini, NR Chandra, ... Nucleic acids research 43 (D1), D300-D305, 2015 | 13 | 2015 |
| The antigen binding sites of various hCG monoclonal antibodies show homology to different domains of LH receptor RA Gadkari, S Sandhya, R Sowdhamini, RR Dighe Molecular and cellular endocrinology 260, 23-32, 2007 | 13 | 2007 |
| Molecular and structural basis of cross-reactivity in M. tuberculosis toxin–antitoxin systems H Tandon, A Melarkode Vattekatte, N Srinivasan, S Sandhya Toxins 12 (8), 481, 2020 | 12 | 2020 |
| Protein sequence design and its applications S Sandhya, R Mudgal, G Kumar, R Sowdhamini, N Srinivasan Current opinion in structural biology 37, 71-80, 2016 | 12 | 2016 |
| Cascaded walks in protein sequence space: use of artificial sequences in remote homology detection between natural proteins S Sandhya, R Mudgal, C Jayadev, KR Abhinandan, R Sowdhamini, ... Molecular BioSystems 8 (8), 2076-2084, 2012 | 11 | 2012 |
| P. Sikarwar, A., Chandra, N. & Satyanarayana Rao, MR Mapping post-translational modifications of mammalian testicular specific histone variant TH2B in tetraploid and haploid … SK Pentakota, S Sandhya J. Proteome Res 13, 5603-5617, 2014 | 7 | 2014 |
N. SrinivasanProfessor, Molecular Biophysics Unit, Indian Institute of ScienceVerified email at iisc.ac.in
