| Efficient microbial colony growth dynamics quantification with ColTapp, an automated image analysis application J Bär, M Boumasmoud, RD Kouyos, AS Zinkernagel, C Vulin Scientific reports 10 (1), 16084, 2020 | 42 | 2020 |
| Intracellular Environment and agr System Affect Colony Size Heterogeneity of Staphylococcus aureus N Häffner, J Bär, V Dengler Haunreiter, S Mairpady Shambat, K Seidl, ... Frontiers in microbiology 11, 1415, 2020 | 22 | 2020 |
| Strong effects of lab-to-field environmental transitions on the bacterial intestinal microbiota of Mus musculus are modulated by Trichuris murisinfection J Bär, JM Leung, C Hansen, P Loke, AR Hall, L Conour, AL Graham FEMS microbiology ecology 96 (10), fiaa167, 2020 | 14 | 2020 |
| Quantification of within-patient Staphylococcus aureus phenotypic heterogeneity as a proxy for the presence of persisters across clinical presentations J Bär, M Boumasmoud, SM Shambat, C Vulin, M Huemer, TA Schweizer, ... Clinical Microbiology and Infection 28 (7), 1022. e1-1022. e7, 2022 | 11 | 2022 |
| Serine-threonine phosphoregulation by PknB and Stp contributes to quiescence and antibiotic tolerance in Staphylococcus aureus M Huemer, S Mairpady Shambat, S Hertegonne, J Bergada-Pijuan, ... Science Signaling 16 (766), eabj8194, 2023 | 7 | 2023 |
| Rapid detection of Staphylococcus aureus and Streptococcus pneumoniae by real-time analysis of volatile metabolites A Gómez-Mejia, K Arnold, J Bär, KD Singh, TC Scheier, SD Brugger, ... Iscience 25 (10), 2022 | 6 | 2022 |
| Quantifying variation in bacterial reproductive fitness: A high-throughput method PM Frey, J Baer, J Bergada-Pijuan, C Lawless, PK Bühler, RD Kouyos, ... Msystems 6 (1), 10.1128/msystems. 01323-20, 2021 | 6 | 2021 |
| Ser/Thr phospho-regulation by PknB and Stp mediates bacterial quiescence and antibiotic persistence in Staphylococcus aureus M Huemer, SM Shambat, S Pereira, L Van Gestel, J Bergada-Pijuan, ... BioRxiv, 2021.05. 06.442895, 2021 | 5 | 2021 |
| C-di-AMP levels modulate Staphylococcus aureus cell wall thickness, response to oxidative stress, and antibiotic resistance and tolerance V Dengler Haunreiter, A Tarnutzer, J Bär, M von Matt, S Hertegonne, ... Microbiology Spectrum 11 (6), e02788-23, 2023 | 1 | 2023 |
| ColTapp, an automated image analysis application for efficient microbial colony growth dynamics quantification J Bär, M Boumasmoud, R Kouyos, AS Zinkernagel, C Vulin bioRxiv, 2020.05. 27.119040, 2020 | 1 | 2020 |
| Quantifying variation in bacterial reproductive fitness with and without antimicrobial resistance: a high-throughput method PM Frey, J Baer, J Bergadà Pijuan, C Lawless, PK Bühler, RD Kouyos, ... bioRxiv, 2020.05. 13.093807, 2020 | 1 | 2020 |
| Single-cell approach dissecting agr quorum sensing dynamics in Staphylococcus aureus J Baer, SGV Charlton, A Tarnutzer, GS Ugolini, E Secchi, AS Zinkernagel bioRxiv, 2024.02. 27.582246, 2024 | | 2024 |
| C-di-AMP levels modulate Staphylococcus aureus cell wall thickness as well as virulence and contribute to antibiotic resistance and tolerance A Tarnutzer, J Baer, M von Matt, S Hertegonne, F Andreoni, C Vulin, ... | | 2023 |
| Insights from Images on Bacterial Growth, Antibiotic Persistence and Quorum Sensing J Bär University of Zurich, 2023 | | 2023 |
| Author Correction: Efficient microbial colony growth dynamics quantification with ColTapp, an automated image analysis application J Bär, M Boumasmoud, RD Kouyos, AS Zinkernagel, C Vulin Scientific Reports 11, 2021 | | 2021 |
