| Twenty years of ModelDB and beyond: building essential modeling tools for the future of neuroscience. RA McDougal, TM Morse, T Carnevale, L Marenco, R Wang, M Migliore, ... Journal of computational neuroscience 42 (1), 1-10, 2017 | 156 | 2017 |
| NetPyNE, a tool for data-driven multiscale modeling of brain circuits S Dura-Bernal, BA Suter, P Gleeson, M Cantarelli, A Quintana, ... Elife 8, e44494, 2019 | 84 | 2019 |
| Open Source Brain: a collaborative resource for visualizing, analyzing, simulating, and developing standardized models of neurons and circuits P Gleeson, M Cantarelli, B Marin, A Quintana, M Earnshaw, S Sadeh, ... Neuron 103 (3), 395-411. e5, 2019 | 56 | 2019 |
| Human Neocortical Neurosolver (HNN), a new software tool for interpreting the cellular and network origin of human MEG/EEG data SA Neymotin, DS Daniels, B Caldwell, RA McDougal, NT Carnevale, ... eLife 9, e51214, 2020 | 54 | 2020 |
| Reaction-diffusion in the NEURON simulator RA McDougal, ML Hines, WW Lytton Front. Neuroinform 7 (28), 10.3389, 2013 | 54 | 2013 |
| Reproducibility in computational neuroscience models and simulations RA McDougal, AS Bulanova, WW Lytton IEEE Transactions on Biomedical Engineering 63 (10), 2021-2035, 2016 | 53 | 2016 |
| Alternative splicing regulates kv3. 1 polarized targeting to adjust maximal spiking frequency Y Gu, J Barry, R McDougel, D Terman, C Gu Journal of Biological Chemistry 287 (3), 1755-1769, 2012 | 44 | 2012 |
| Simulation neurotechnologies for advancing brain research: Parallelizing large networks in neuron WW Lytton, AH Seidenstein, S Dura-Bernal, RA McDougal, F Schürmann, ... Neural computation 28 (10), 2063-2090, 2016 | 42 | 2016 |
| Neuronal calcium wave propagation varies with changes in endoplasmic reticulum parameters: a computer model SA Neymotin, RA McDougal, MA Sherif, CP Fall, ML Hines, WW Lytton Neural computation 27 (4), 898-924, 2015 | 33 | 2015 |
| Calcium regulation of HCN channels supports persistent activity in a multiscale model of neocortex SA Neymotin, RA McDougal, AS Bulanova, M Zeki, P Lakatos, D Terman, ... Neuroscience 316, 344-366, 2016 | 32 | 2016 |
| Using NEURON for Reaction-Diffusion modeling of extracellular dynamics AJH Newton, RA McDougal, ML Hines, WW Lytton Frontiers in neuroinformatics 12, 41, 2018 | 26 | 2018 |
| 3D-printer visualization of neuron models RA McDougal, GM Shepherd Frontiers in neuroinformatics 9, 18, 2015 | 24 | 2015 |
| Neuron names: a gene-and property-based name format, with special reference to cortical neurons GM Shepherd, L Marenco, ML Hines, M Migliore, RA McDougal, ... Frontiers in neuroanatomy 13, 25, 2019 | 22 | 2019 |
| ModelView for ModelDB: Online Presentation of Model Structure RA McDougal, TM Morse, ML Hines, GM Shepherd Neuroinformatics 13 (4), 459-470, 2015 | 18 | 2015 |
| NTW-MT: a multi-threaded simulator for reaction diffusion simulations in NEURON Z Lin, C Tropper, MN Ishlam Patoary, RA McDougal, WW Lytton, ... Proceedings of the 3rd ACM SIGSIM Conference on Principles of Advanced …, 2015 | 14 | 2015 |
| Water-tight membranes from neuronal morphology files RA McDougal, ML Hines, WW Lytton Journal of neuroscience methods 220 (2), 167-178, 2013 | 14 | 2013 |
| ORDB, HORDE, ODORactor and other on-line knowledge resources of olfactory receptor-odorant interactions L Marenco, R Wang, R McDougal, T Olender, M Twik, E Bruford, X Liu, ... Database 2016, baw132, 2016 | 13 | 2016 |
| Multithreaded Stochastic PDES for Reactions and Diffusions in Neurons Z Lin, C Tropper, RA McDougal, MN Ishlam Patoary, WW Lytton, Y Yao, ... ACM Transactions on Modeling and Computer Simulation (TOMACS) 27 (2), 7, 2017 | 9 | 2017 |
| Neuron time warp MNI Patoary, C Tropper, Z Lin, R McDougal, WW Lytton Proceedings of the Winter Simulation Conference 2014, 3447-3458, 2014 | 8 | 2014 |
| Reproducibility and Rigour in Computational Neuroscience SM Crook, AP Davison, RA McDougal, HE Plesser Frontiers in Neuroinformatics 14, 2020 | 5 | 2020 |
Ted CarnevaleSenior Research Scientist, Yale School of MedicineVerified email at yale.edu
