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Daniel Day
Daniel Day
Postdoctoral Fellow, Whitehead Institute
Verifisert e-postadresse på mit.edu
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Coactivator condensation at super-enhancers links phase separation and gene control
BR Sabari, A Dall’Agnese, A Boija, IA Klein, EL Coffey, K Shrinivas, ...
Science 361 (6400), eaar3958, 2018
13512018
Activation of proto-oncogenes by disruption of chromosome neighborhoods
D Hnisz, AS Weintraub, DS Day, AL Valton, RO Bak, CH Li, J Goldmann, ...
Science 351 (6280), 1454-1458, 2016
8532016
YY1 is a structural regulator of enhancer-promoter loops
AS Weintraub, CH Li, AV Zamudio, AA Sigova, NM Hannett, DS Day, ...
Cell 171 (7), 1573-1588. e28, 2017
6362017
An assessment of histone-modification antibody quality
TA Egelhofer, A Minoda, S Klugman, K Lee, P Kolasinska-Zwierz, ...
Nature structural & molecular biology 18 (1), 91-93, 2011
4402011
Comparative analysis of metazoan chromatin organization
JWK Ho, YL Jung, T Liu, BH Alver, S Lee, K Ikegami, KA Sohn, A Minoda, ...
Nature 512 (7515), 449-452, 2014
3652014
Insulated neighborhoods: structural and functional units of mammalian gene control
D Hnisz, DS Day, RA Young
Cell 167 (5), 1188-1200, 2016
3542016
CDK12 loss in cancer cells affects DNA damage response genes through premature cleavage and polyadenylation
M Krajewska, R Dries, AV Grassetti, S Dust, Y Gao, H Huang, B Sharma, ...
Nature communications 10 (1), 1-16, 2019
1232019
Transcriptional Dysregulation of MYC Reveals Common Enhancer-Docking Mechanism
J Schuijers, JC Manteiga, AS Weintraub, DS Day, AV Zamudio, D Hnisz, ...
Cell reports 23 (2), 349-360, 2018
1202018
Estimating enrichment of repetitive elements from high-throughput sequence data
DS Day, LJ Luquette, PJ Park, PV Kharchenko
Genome biology 11 (6), 1-12, 2010
1122010
Interrogating translational efficiency and lineage-specific transcriptomes using ribosome affinity purification
P Zhou, Y Zhang, Q Ma, F Gu, DS Day, A He, B Zhou, J Li, SM Stevens, ...
Proceedings of the National Academy of Sciences 110 (38), 15395-15400, 2013
1112013
A dynamic H3K27ac signature identifies VEGFA-stimulated endothelial enhancers and requires EP300 activity
B Zhang, DS Day, JW Ho, L Song, J Cao, D Christodoulou, JG Seidman, ...
Genome research 23 (6), 917-927, 2013
922013
BORIS promotes chromatin regulatory interactions in treatment-resistant cancer cells
DN Debruyne, R Dries, S Sengupta, D Seruggia, Y Gao, B Sharma, ...
Nature 572 (7771), 676-680, 2019
792019
Amniocytes can serve a dual function as a source of iPS cells and feeder layers
RM Anchan, P Quaas, B Gerami-Naini, H Bartake, A Griffin, Y Zhou, ...
Human molecular genetics 20 (5), 962-974, 2011
752011
Comprehensive analysis of promoter-proximal RNA polymerase II pausing across mammalian cell types
DS Day, B Zhang, SM Stevens, F Ferrari, EN Larschan, PJ Park, WT Pu
Genome biology 17 (1), 1-17, 2016
722016
VEGF amplifies transcription through ETS1 acetylation to enable angiogenesis
J Chen, Y Fu, DS Day, Y Sun, S Wang, X Liang, F Gu, F Zhang, ...
Nature communications 8 (1), 1-13, 2017
682017
Cdk1 controls global epigenetic landscape in embryonic stem cells
W Michowski, JM Chick, C Chu, A Kolodziejczyk, Y Wang, JM Suski, ...
Molecular cell 78 (3), 459-476. e13, 2020
492020
A dynamic and integrated epigenetic program at distal regions orchestrates transcriptional responses to VEGFA
S Wang, J Chen, SP Garcia, X Liang, F Zhang, P Yan, H Yu, W Wei, Z Li, ...
Genome research 29 (2), 193-207, 2019
92019
Methods and assays for modulating gene transcription by modulating condensates
RA Young, PA Sharp, AK Chakraborty, A Dall'Agnese, K Shrinivas, ...
US Patent App. 17/040,967, 2022
12022
STAG2 Mutations Alter Cohesin Ring Function and Provide Therapeutic Vulnerabilities in Acute Myeloid Leukemia
Z Tothova, JM Krill-Burger, DS Day, JE Haydu, BJ Abraham, CC Landers, ...
Blood, The Journal of the American Society of Hematology 132 (Supplement 1 …, 2018
12018
Targeting transcription in heart failure via CDK7/12/13 inhibition
A Hsu, Q Duan, DS Day, X Luo, S McMahon, Y Huang, ZB Feldman, ...
Nature communications 13 (1), 1-11, 2022
2022
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Artikler 1–20