Alice Carolyn McHardy

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Medforfattere

Isidore RigoutsosThomas Jefferson UniversityVerifisert e-postadresse på jefferson.edu
Philip HugenholtzAustralian Centre for Ecogenomics, SCMB, The University of QueenslandVerifisert e-postadresse på uq.edu.au
Johannes DrögeVerifisert e-postadresse på uni-duesseldorf.de
Phil B. PopeAssociate Professor, Norwegian University of Life SciencesVerifisert e-postadresse på nmbu.no
Folker MeyerUniversity of Duisburg-Essen; University Hospital EssenVerifisert e-postadresse på uni-due.de
Aristotelis TsirigosProfessor, NYU School of Medicine, NYVerifisert e-postadresse på nyulangone.org
Nikos C KyrpidesJoint Genome Institute, Lawrence Berkeley National LaboratoryVerifisert e-postadresse på lbl.gov
Hector Garcia MartinLawrence Berkeley National LaboratoryVerifisert e-postadresse på lbl.gov
Lutz KrauseUniversity of Queensland Diamantina InstituteVerifisert e-postadresse på uq.edu.au
Susannah TringeDOE Joint Genome Institute, Lawrence Berkeley National LaboratoryVerifisert e-postadresse på lbl.gov
Prof. Dr. Jörn KalinowskiHead of Technology Platform Genomics, Center for Biotechnology, Bielefeld UniversityVerifisert e-postadresse på cebitec.uni-bielefeld.de
Kaustubh Raosaheb PatilForschungszentrum Jülich, Heinrich Heine Universität DüsseldorfVerifisert e-postadresse på mit.edu
Tien HuynhIBM Thomas J. Watson Research CenterVerifisert e-postadresse på us.ibm.com
Peter TurnbaughUniversity of California, San FranciscoVerifisert e-postadresse på ucsf.edu
Christopher QuinceUniversity of WarwickVerifisert e-postadresse på warwick.ac.uk
Christian RückertSenior Research Scientist, CeBiTec, Bielefeld UniversityVerifisert e-postadresse på cebitec.uni-bielefeld.de
Alex CopelandJoint Genome InstituteVerifisert e-postadresse på lbl.gov
Andreas WilkeArgonne National LaboratoryVerifisert e-postadresse på anl.gov
Tim W. NattkemperProfessor of Computer Science, Bielefeld UniversityVerifisert e-postadresse på uni-bielefeld.de
Jens StoyeBielefeld University, Faculty of Technology and Center for Biotechnology (CeBiTec)Verifisert e-postadresse på uni-bielefeld.de

Alice Carolyn McHardy

Helmholtz Centre for Infection Research

Verifisert e-postadresse på helmholtz-hzi.de - Startside

Computational Biology Metagenomics Viral Evolution Next Generation Sequencing


Tittel Sortér etter sitater Sortér etter år Sortér etter tittel	Sitert av Sitert av	År
The subsystems approach to genome annotation and its use in the project to annotate 1000 genomes R Overbeek, T Begley, RM Butler, JV Choudhuri, HY Chuang, M Cohoon, ... Nucleic acids research 33 (17), 5691-5702, 2005	1873	2005
Metagenomic and functional analysis of hindgut microbiota of a wood-feeding higher termite F Warnecke, P Luginbühl, N Ivanova, M Ghassemian, TH Richardson, ... Nature 450 (7169), 560-565, 2007	1297	2007
The complete Corynebacterium glutamicum ATCC 13032 genome sequence and its impact on the production of L-aspartate-derived amino acids and vitamins J Kalinowski, B Bathe, D Bartels, N Bischoff, M Bott, A Burkovski, N Dusch, ... Journal of biotechnology 104 (1-3), 5-25, 2003	989	2003
Defining seasonal marine microbial community dynamics JA Gilbert, JA Steele, JG Caporaso, L Steinbrück, J Reeder, B Temperton, ... The ISME journal 6 (2), 298-308, 2012	760	2012
GenDB—an open source genome annotation system for prokaryote genomes F Meyer, A Goesmann, AC McHardy, D Bartels, T Bekel, JÈ Clausen, ... Nucleic acids research 31 (8), 2187-2195, 2003	756	2003
Metagenomic analysis of two enhanced biological phosphorus removal (EBPR) sludge communities HG Martin, N Ivanova, V Kunin, F Warnecke, KW Barry, AC McHardy, ... Nature biotechnology 24 (10), 1263-1269, 2006	699	2006
Structure and function of the bacterial root microbiota in wild and domesticated barley D Bulgarelli, R Garrido-Oter, PC Münch, A Weiman, J Dröge, Y Pan, ... Cell host & microbe 17 (3), 392-403, 2015	560	2015
Functional overlap of the Arabidopsis leaf and root microbiota Y Bai, DB Müller, G Srinivas, R Garrido-Oter, E Potthoff, M Rott, ... Nature 528 (7582), 364-369, 2015	549	2015
Accurate phylogenetic classification of variable-length DNA fragments AC McHardy, HG Martín, A Tsirigos, P Hugenholtz, I Rigoutsos Nature methods 4 (1), 63-72, 2007	549	2007
Organismal, genetic, and transcriptional variation in the deeply sequenced gut microbiomes of identical twins PJ Turnbaugh, C Quince, JJ Faith, AC McHardy, T Yatsunenko, F Niazi, ... Proceedings of the National Academy of Sciences 107 (16), 7503-7508, 2010	499	2010
The amphioxus genome illuminates vertebrate origins and cephalochordate biology LZ Holland, R Albalat, K Azumi, È Benito-Gutiérrez, MJ Blow, ... Genome research 18 (7), 1100-1111, 2008	498	2008
Complete genome sequence of the myxobacterium Sorangium cellulosum S Schneiker, O Perlova, O Kaiser, K Gerth, A Alici, MO Altmeyer, D Bartels, ... Nature biotechnology 25 (11), 1281-1289, 2007	404	2007
Use of simulated data sets to evaluate the fidelity of metagenomic processing methods K Mavromatis, N Ivanova, K Barry, H Shapiro, E Goltsman, AC McHardy, ... Nature methods 4 (6), 495-500, 2007	381	2007
Genome sequence of the ubiquitous hydrocarbon-degrading marine bacterium Alcanivorax borkumensis S Schneiker, VAPM dos Santos, D Bartels, T Bekel, M Brecht, ... Nature biotechnology 24 (8), 997-1004, 2006	374	2006
Insights into genome plasticity and pathogenicity of the plant pathogenic bacterium Xanthomonas campestris pv. vesicatoria revealed by the complete genome sequence F Thieme, R Koebnik, T Bekel, C Berger, J Boch, D Büttner, C Caldana, ... Journal of bacteriology 187 (21), 7254-7266, 2005	372	2005
Microbiota and host nutrition across plant and animal kingdoms S Hacquard, R Garrido-Oter, A González, S Spaepen, G Ackermann, ... Cell host & microbe 17 (5), 603-616, 2015	343	2015
Critical assessment of metagenome interpretation—a benchmark of metagenomics software A Sczyrba, P Hofmann, P Belmann, D Koslicki, S Janssen, J Dröge, ... Nature methods 14 (11), 1063-1071, 2017	334	2017
Complete genome of the mutualistic, N 2-fixing grass endophyte Azoarcus sp. strain BH72 A Krause, A Ramakumar, D Bartels, F Battistoni, T Bekel, J Boch, M Böhm, ... Nature biotechnology 24 (11), 1384-1390, 2006	268	2006
High-resolution metagenomics targets specific functional types in complex microbial communities MG Kalyuzhnaya, A Lapidus, N Ivanova, AC Copeland, AC McHardy, ... Nature biotechnology 26 (9), 1029-1034, 2008	263	2008
Meeting report: the terabase metagenomics workshop and the vision of an Earth microbiome project JA Gilbert, F Meyer, D Antonopoulos, P Balaji, CT Brown, CT Brown, ... Standards in genomic sciences 3 (3), 243-248, 2010	247	2010

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