Comprehensive analysis of heterochromatin-and RNAi-mediated epigenetic control of the fission yeast genome HP Cam, T Sugiyama, ES Chen, X Chen, PC FitzGerald, SIS Grewal Nature genetics 37 (8), 809-819, 2005 | 581 | 2005 |
Identification of tandem duplicate regulatory small RNAs in Pseudomonas aeruginosa involved in iron homeostasis PJ Wilderman, NA Sowa, DJ FitzGerald, PC FitzGerald, S Gottesman, ... Proceedings of the National Academy of Sciences 101 (26), 9792-9797, 2004 | 528 | 2004 |
Reactivity of human sera in a sensitive, high-throughput pseudovirus-based papillomavirus neutralization assay for HPV16 and HPV18 DV Pastrana, CB Buck, YYS Pang, CD Thompson, PE Castle, ... Virology 321 (2), 205-216, 2004 | 426 | 2004 |
Cohesin-dependent globules and heterochromatin shape 3D genome architecture in S. pombe T Mizuguchi, G Fudenberg, S Mehta, JM Belton, N Taneja, HD Folco, ... Nature 516 (7531), 432-435, 2014 | 303 | 2014 |
Clustering of DNA sequences in human promoters PC FitzGerald, A Shlyakhtenko, AA Mir, C Vinson Genome research 14 (8), 1562-1574, 2004 | 283 | 2004 |
Small RNA regulators and the bacterial response to stress S Gottesman, CA McCullen, M Guillier, CK Vanderpool, N Majdalani, ... Cold Spring Harbor symposia on quantitative biology 71, 1-11, 2006 | 279 | 2006 |
Stepwise histone replacement by SWR1 requires dual activation with histone H2A. Z and canonical nucleosome E Luk, A Ranjan, PC FitzGerald, G Mizuguchi, Y Huang, D Wei, C Wu Cell 143 (5), 725-736, 2010 | 265 | 2010 |
CpG methylation of half-CRE sequences creates C/EBPα binding sites that activate some tissue-specific genes V Rishi, P Bhattacharya, R Chatterjee, J Rozenberg, J Zhao, K Glass, ... Proceedings of the National Academy of Sciences 107 (47), 20311-20316, 2010 | 263 | 2010 |
Whole genome analysis of a schistosomiasis-transmitting freshwater snail CM Adema, LDW Hillier, CS Jones, ES Loker, M Knight, P Minx, ... Nature communications 8 (1), 15451, 2017 | 258 | 2017 |
Filarial nematode parasites secrete a homologue of the human cytokine macrophage migration inhibitory factor DV Pastrana, N Raghavan, P FitzGerald, SW Eisinger, C Metz, R Bucala, ... Infection and immunity 66 (12), 5955-5963, 1998 | 258 | 1998 |
Distinct roles of HDAC complexes in promoter silencing, antisense suppression and DNA damage protection E Nicolas, T Yamada, HP Cam, PC FitzGerald, R Kobayashi, SIS Grewal Nature structural & molecular biology 14 (5), 372-380, 2007 | 219 | 2007 |
Nucleosome-free region dominates histone acetylation in targeting SWR1 to promoters for H2A. Z replacement A Ranjan, G Mizuguchi, PC FitzGerald, D Wei, F Wang, Y Huang, E Luk, ... Cell 154 (6), 1232-1245, 2013 | 200 | 2013 |
Comparative genomics of Drosophila and human core promoters PC FitzGerald, D Sturgill, A Shyakhtenko, B Oliver, C Vinson Genome biology 7, 1-22, 2006 | 197 | 2006 |
Comparative validation of the D. melanogaster modENCODE transcriptome annotation ZX Chen, D Sturgill, J Qu, H Jiang, S Park, N Boley, AM Suzuki, ... Genome research 24 (7), 1209-1223, 2014 | 174 | 2014 |
Reciprocal modifications of CLIC4 in tumor epithelium and stroma mark malignant progression of multiple human cancers KS Suh, JM Crutchley, A Koochek, A Ryscavage, K Bhat, T Tanaka, ... Clinical Cancer Research 13 (1), 121-131, 2007 | 113 | 2007 |
An efficient single-cell RNA-seq approach to identify neoantigen-specific T cell receptors YC Lu, Z Zheng, PF Robbins, E Tran, TD Prickett, JJ Gartner, YF Li, S Ray, ... Molecular Therapy 26 (2), 379-389, 2018 | 98 | 2018 |
Comparative gene analysis of Biomphalaria glabrata hemocytes pre-and post-exposure to miracidia of Schistosoma mansoni N Raghavan, AN Miller, M Gardner, PC FitzGerald, AR Kerlavage, ... Molecular and Biochemical Parasitology 126 (2), 181-191, 2003 | 93 | 2003 |
Effects of sequence alterations in a DNA segment containing the 5 S RNA gene from Lytechinus variegatus on positioning of a nucleosome core particle in vitro. PC FitzGerald, RT Simpson Journal of Biological Chemistry 260 (28), 15318-15324, 1985 | 84 | 1985 |
All and only CpG containing sequences are enriched in promoters abundantly bound by RNA polymerase II in multiple tissues JM Rozenberg, A Shlyakhtenko, K Glass, V Rishi, MV Myakishev, ... BMC genomics 9, 1-13, 2008 | 81 | 2008 |
Cellular stress created by intermediary metabolite imbalances SJ Lee, A Trostel, P Le, R Harinarayanan, PC FitzGerald, S Adhya Proceedings of the National Academy of Sciences 106 (46), 19515-19520, 2009 | 75 | 2009 |