| Genome-wide identification of cancer/testis genes and their association with prognosis in a pan-cancer analysis VL da Silva, AF Fonseca, M Fonseca, TE da Silva, AC Coelho, JE Kroll, ... Oncotarget 8 (54), 92966, 2017 | 61 | 2017 |
| Resveratrol decreases the expression of genes involved in inflammation through transcriptional regulation DML Pinheiro, AHS de Oliveira, LG Coutinho, FL Fontes, ... Free Radical Biology and Medicine 130, 8-22, 2019 | 48 | 2019 |
| Bioinformatics analysis of the human surfaceome reveals new targets for a variety of tumor types AL Fonseca, VL da Silva, MM da Fonsêca, ITJ Meira, TE da Silva, JE Kroll, ... International journal of genomics 2016, 2016 | 17 | 2016 |
| Essential Saccharomyces cerevisiae genome instability suppressing genes identify potential human tumor suppressors A Srivatsan, B Li, DN Sanchez, SB Somach, VL da Silva, SJ de Souza, ... Proceedings of the National Academy of Sciences 116 (35), 17377-17382, 2019 | 9 | 2019 |
| A tool for integrating genetic and mass spectrometry‐based peptide data: Proteogenomics Viewer: PV: A genome browser‐like tool, which includes MS data visualization and peptide … JE Kroll, VL da Silva, SJ de Souza, GA de Souza Bioessays 39 (7), 1700015, 2017 | 8 | 2017 |
| Populational landscape of INDELs affecting transcription factor-binding sites in humans AM Ribeiro-dos-Santos, VL da Silva, JES de Souza, SJ de Souza BMC genomics 16, 1-11, 2015 | 7 | 2015 |
| Chemical inhibition of Apurinic-apyrimidinic endonuclease 1 Redox and DNA repair functions affects the inflammatory response via different but overlapping mechanisms TT Oliveira, FL Fontes-Dantas, RK de Medeiros Oliveira, DML Pinheiro, ... Frontiers in Cell and Developmental Biology 9, 731588, 2021 | 6 | 2021 |
| XPA deficiency affects the ubiquitin-proteasome system function AM de Sousa Leal, LB de Azevedo Medeiros, CO Muñoz-Cadavid, ... DNA repair 94, 102937, 2020 | 6 | 2020 |
| dbPepVar: a novel cancer proteogenomics database LM Da Cunha, P Terrematte, TDS Fiuza, VÉCL Da Silva, JE Kroll, ... IEEE Access 10, 90982-90994, 2022 | 2 | 2022 |
| A comprehensive analysis of core polyadenylation sequences and regulation by microRNAs in a set of cancer predisposition genes IA Vieira, M Recamonde-Mendoza, VL da Silva, DP Leão, MR Scheid, ... Gene 712, 143943, 2019 | 2 | 2019 |
| Resveratrol decreases the expression of genes involved in inflammation through transcriptional regulation DM Lopes Pinheiro, AH Sales de Oliveira, LG Coutinho, FL Fontes, ... FREE RADICAL BIOLOGY AND MEDICINE 130, 8-22, 2019 | 2 | 2019 |
| Bio-DIA: A web-based tool for data and algorithms integration T Dantas, VL da Silva, AF Fonseca, DAA Morais, A Signoretti, W Blanco bioRxiv, 2019.12. 13.875666, 2019 | | 2019 |
| Gain of transcription factor binding sites is associated to changes in the expression signature of human brain and testis and is correlated to genes with higher expression breadth VL da Silva, AMR Dos Santos, W Blanco, SJ de Souza Science China Life Sciences 62, 526-534, 2019 | | 2019 |
| A tool for integrating genetic and mass spectrometry-based peptide data: Proteogenomics Viewer. JE Kroll, VL da Silva, SJ de Souza, GA de Souza Bioessays 39 (7), 2017 | | 2017 |
| Polyadenylation regulatory sequences and frequency of alternative polyadenylation sites in a comprehensive set of cancer predisposition genes IA Vieira, M Recamonde-Mendoza, VL Silva, DP Leão, MR Scheid, ... Anais da EGB: Escola Gaúcha de Bioinformática, Julho 17-21, 2017, Porto …, 2017 | | 2017 |
